Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHMT2P34897 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHMT2P34897 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.25□□□□□ -1.57
SHMT2P34897 AL049779.2-201ENST00000553847 315 ntBASIC5.25□□□□□ -1.57
SHMT2P34897 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.25□□□□□ -1.57
SHMT2P34897 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHMT2P34897 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHMT2P34897 AL359715.3-201ENST00000569267 2123 ntBASIC5.25□□□□□ -1.57
SHMT2P34897 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.25□□□□□ -1.57
SHMT2P34897 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.25□□□□□ -1.57
SHMT2P34897 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.25□□□□□ -1.57
SHMT2P34897 AP000894.4-201ENST00000610185 483 ntBASIC5.25□□□□□ -1.57
SHMT2P34897 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.25□□□□□ -1.57
SHMT2P34897 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHMT2P34897 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHMT2P34897 PROS2P-201ENST00000474651 1951 ntBASIC5.25□□□□□ -1.57
SHMT2P34897 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHMT2P34897 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.25□□□□□ -1.57
SHMT2P34897 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SHMT2P34897 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.25□□□□□ -1.57
SHMT2P34897 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHMT2P34897 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.24□□□□□ -1.57
SHMT2P34897 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SHMT2P34897 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHMT2P34897 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.24□□□□□ -1.57
SHMT2P34897 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHMT2P34897 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.24□□□□□ -1.57
SHMT2P34897 SNORA16A-201ENST00000384342 137 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AL133388.1-201ENST00000404509 287 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 MIR1286-201ENST00000408112 78 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AL390774.1-201ENST00000411924 246 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AP000534.2-201ENST00000412729 568 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 RPL12P18-201ENST00000437175 325 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 RPEP1-201ENST00000504507 658 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AC020937.1-201ENST00000519677 1013 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AC079064.1-201ENST00000528365 362 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AC130364.2-201ENST00000528639 604 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
SHMT2P34897 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.24□□□□□ -1.57
SHMT2P34897 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.24□□□□□ -1.57
SHMT2P34897 AC126177.5-201ENST00000549599 178 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.24□□□□□ -1.57
SHMT2P34897 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.24□□□□□ -1.57
SHMT2P34897 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.24□□□□□ -1.57
SHMT2P34897 AC008115.4-201ENST00000619780 775 ntBASIC5.24□□□□□ -1.57
SHMT2P34897 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.24□□□□□ -1.57
SHMT2P34897 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SHMT2P34897 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.24□□□□□ -1.57
SHMT2P34897 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHMT2P34897 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHMT2P34897 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHMT2P34897 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHMT2P34897 AC011755.1-201ENST00000623763 2049 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHMT2P34897 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHMT2P34897 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHMT2P34897 RNA5SP183-201ENST00000362452 119 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.23□□□□□ -1.57
SHMT2P34897 FAM96AP1-201ENST00000430879 482 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 RPL7L1P9-201ENST00000431298 745 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.23□□□□□ -1.57
SHMT2P34897 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.23□□□□□ -1.57
SHMT2P34897 AL606490.1-201ENST00000452266 765 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.23□□□□□ -1.57
SHMT2P34897 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.23□□□□□ -1.57
SHMT2P34897 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.23□□□□□ -1.57
SHMT2P34897 USP9YP2-201ENST00000504503 1000 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 AC021193.1-201ENST00000511607 420 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 USP9YP1-201ENST00000513521 1002 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.23□□□□□ -1.57
SHMT2P34897 SCARNA21.2-201ENST00000516600 166 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.23□□□□□ -1.57
SHMT2P34897 AC027026.1-201ENST00000532323 742 ntBASIC5.23□□□□□ -1.57
SHMT2P34897 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.23□□□□□ -1.57
SHMT2P34897 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHMT2P34897 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms