Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RNU6-943P-201ENST00000516960 98 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 AC130364.2-201ENST00000528639 604 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 GCSHP4-201ENST00000538792 439 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.58□□□□□ -1.36
TM4SF1P30408 NPM1P42-201ENST00000560329 862 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TM4SF1P30408 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 UBE2FP2-201ENST00000566646 462 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.58□□□□□ -1.36
TM4SF1P30408 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.58□□□□□ -1.36
TM4SF1P30408 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.58□□□□□ -1.36
TM4SF1P30408 MEMO1P5-201ENST00000604810 406 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.58□□□□□ -1.36
TM4SF1P30408 MTCO1P1-201ENST00000624263 1081 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 AC135068.12-201ENST00000637370 931 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 AL034408.1-201ENST00000637712 664 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TM4SF1P30408 AL078595.2-201ENST00000605309 1780 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TM4SF1P30408 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.58□□□□□ -1.36
TM4SF1P30408 AC120036.2-201ENST00000509729 1474 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 THAP12P8-201ENST00000447914 2115 ntBASIC6.58□□□□□ -1.36
TM4SF1P30408 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TM4SF1P30408 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF1P30408 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF1P30408 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TM4SF1P30408 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF1P30408 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TM4SF1P30408 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF1P30408 RNA5SP90-201ENST00000364801 99 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 RPS20P25-201ENST00000412447 352 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AC097523.2-201ENST00000435551 652 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF1P30408 KRT8P51-201ENST00000438938 274 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 RPL36AP15-201ENST00000444514 266 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF1P30408 NDUFA12P1-201ENST00000455914 406 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 RN7SL385P-201ENST00000468873 276 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 TRBV8-1-201ENST00000481590 279 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 HPRT1P1-201ENST00000509498 657 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF1P30408 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.57□□□□□ -1.36
TM4SF1P30408 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TM4SF1P30408 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.57□□□□□ -1.36
TM4SF1P30408 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.57□□□□□ -1.36
TM4SF1P30408 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TM4SF1P30408 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.57□□□□□ -1.36
TM4SF1P30408 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AL356317.1-201ENST00000396110 1436 ntBASIC6.57□□□□□ -1.36
TM4SF1P30408 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TM4SF1P30408 AC104964.3-201ENST00000606115 2860 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF1P30408 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
TM4SF1P30408 AC068769.1-201ENST00000474767 2426 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.56□□□□□ -1.36
TM4SF1P30408 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF1P30408 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.56□□□□□ -1.36
TM4SF1P30408 RPS16P5-201ENST00000406501 404 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF1P30408 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.56□□□□□ -1.36
TM4SF1P30408 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF1P30408 AC073264.2-201ENST00000448886 166 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.56□□□□□ -1.36
TM4SF1P30408 RN7SL188P-201ENST00000469842 285 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.56□□□□□ -1.36
TM4SF1P30408 FTH1P8-201ENST00000498161 514 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF1P30408 AP001804.1-201ENST00000526868 919 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 OR7E128P-201ENST00000532736 1024 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 AC093524.1-201ENST00000564266 1094 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 AC060780.2-201ENST00000589047 198 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 VN1R81P-201ENST00000602085 372 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 AC012414.7-202ENST00000622705 1090 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF1P30408 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF1P30408 AL158152.1-201ENST00000602652 1435 ntBASIC6.56□□□□□ -1.36
TM4SF1P30408 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF1P30408 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TM4SF1P30408 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.56□□□□□ -1.36
TM4SF1P30408 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TM4SF1P30408 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF1P30408 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF1P30408 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms