Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 MAPK10-343ENST00000641677 2546 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 RNU6-1062P-201ENST00000383908 107 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 SNORA7B-201ENST00000384360 139 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL8A1P27658 AL033519.1-201ENST00000407266 307 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AL136100.1-201ENST00000407696 330 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 MIR1266-201ENST00000408125 84 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 MIR548F4-201ENST00000408515 105 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 BX295541.1-201ENST00000417774 250 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 MTCO2P27-201ENST00000420740 428 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC006509.1-201ENST00000420788 634 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 VDAC1P6-201ENST00000430062 855 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 MTCO1P54-201ENST00000430139 712 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 RPSAP32-201ENST00000432681 526 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 PGBD4P3-201ENST00000440731 581 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 RPL23AP20-201ENST00000447965 421 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 AC234771.3-201ENST00000454984 622 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 RN7SL55P-201ENST00000464534 297 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 RN7SL849P-201ENST00000485236 295 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 RPL36AP51-201ENST00000487216 318 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AL445187.1-201ENST00000502685 260 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 KLHL2P1-201ENST00000508691 521 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC113352.1-201ENST00000513196 666 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 SNORA31.13-201ENST00000516624 135 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 RPL10P19-201ENST00000519013 301 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 IGHV7-40-201ENST00000520963 296 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 OR4A45P-201ENST00000529954 901 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.64□□□□□ -1.35
COL8A1P27658 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 RPS7P1-201ENST00000571702 585 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.64□□□□□ -1.35
COL8A1P27658 RN7SL753P-201ENST00000581238 290 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.64□□□□□ -1.35
COL8A1P27658 AL359091.2-201ENST00000609303 556 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 MIR7109-201ENST00000613748 65 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC022106.2-201ENST00000620114 757 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 AC040168.1-201ENST00000623594 991 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 RPSAP68-201ENST00000625020 438 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC6.64□□□□□ -1.35
COL8A1P27658 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL8A1P27658 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 AF131215.2-201ENST00000531549 1710 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 FARSBP1-201ENST00000435808 1778 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL8A1P27658 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL8A1P27658 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 OR5J1P-201ENST00000313544 939 ntBASIC6.63□□□□□ -1.35
COL8A1P27658 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL8A1P27658 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 SNORA63.7-201ENST00000365579 123 ntBASIC6.63□□□□□ -1.35
COL8A1P27658 AC092634.1-201ENST00000366505 199 ntBASIC6.63□□□□□ -1.35
COL8A1P27658 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL8A1P27658 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC6.63□□□□□ -1.35
COL8A1P27658 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL8A1P27658 MIR187-201ENST00000385062 109 ntBASIC6.63□□□□□ -1.35
COL8A1P27658 SNORD65.1-201ENST00000390889 71 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms