Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC023509.5-201ENST00000617434 807 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC089999.3-201ENST00000622440 577 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC120057.5-201ENST00000623840 154 ntBASIC5.75□□□□□ -1.49
CD40P25942 AP000577.1-201ENST00000624366 878 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 ATE1-AS1-202ENST00000636460 506 ntBASIC5.75□□□□□ -1.49
CD40P25942 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 CTAGE11P-201ENST00000451540 2353 ntBASIC5.75□□□□□ -1.49
CD40P25942 SMG1P5-202ENST00000529428 4219 ntBASIC5.75□□□□□ -1.49
CD40P25942 SMG1P2-201ENST00000566127 4221 ntBASIC5.75□□□□□ -1.49
CD40P25942 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 MFSD8-217ENST00000641178 4374 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 RN7SKP250-201ENST00000363924 321 ntBASIC5.74□□□□□ -1.49
CD40P25942 RNU2-22P-201ENST00000411266 212 ntBASIC5.74□□□□□ -1.49
CD40P25942 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 AL139184.1-202ENST00000422303 222 ntBASIC5.74□□□□□ -1.49
CD40P25942 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC092809.1-201ENST00000441469 474 ntBASIC5.74□□□□□ -1.49
CD40P25942 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 TVP23CP1-201ENST00000450317 639 ntBASIC5.74□□□□□ -1.49
CD40P25942 RPL12P26-201ENST00000452430 487 ntBASIC5.74□□□□□ -1.49
CD40P25942 RN7SL741P-201ENST00000482473 289 ntBASIC5.74□□□□□ -1.49
CD40P25942 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.74□□□□□ -1.49
CD40P25942 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC093664.1-201ENST00000511779 289 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 RNU6-1225P-201ENST00000516336 65 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.74□□□□□ -1.49
CD40P25942 AC092375.1-201ENST00000550410 637 ntBASIC5.74□□□□□ -1.49
CD40P25942 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC026956.1-201ENST00000558741 396 ntBASIC5.74□□□□□ -1.49
CD40P25942 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC012435.1-202ENST00000568772 240 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC106785.4-201ENST00000569492 412 ntBASIC5.74□□□□□ -1.49
CD40P25942 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 AC012213.3-201ENST00000577199 777 ntBASIC5.74□□□□□ -1.49
CD40P25942 OR4K7P-201ENST00000580232 945 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC011921.2-201ENST00000589465 152 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.74□□□□□ -1.49
CD40P25942 AC012368.3-201ENST00000604190 219 ntBASIC5.74□□□□□ -1.49
CD40P25942 RN7SKP299-201ENST00000606679 301 ntBASIC5.74□□□□□ -1.49
CD40P25942 AL353600.1-201ENST00000608148 251 ntBASIC5.74□□□□□ -1.49
CD40P25942 AC103591.3-201ENST00000608684 209 ntBASIC5.74□□□□□ -1.49
CD40P25942 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.74□□□□□ -1.49
CD40P25942 AL158063.1-201ENST00000615349 536 ntBASIC5.74□□□□□ -1.49
CD40P25942 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 AL033543.1-201ENST00000623440 13454 ntBASIC5.74□□□□□ -1.49
CD40P25942 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.74□□□□□ -1.49
CD40P25942 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 TATDN2P3-201ENST00000452855 3665 ntBASIC5.74□□□□□ -1.49
CD40P25942 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD40P25942 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.74□□□□□ -1.49
CD40P25942 BX284613.1-201ENST00000452221 1641 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms