Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 RN7SKP145-201ENST00000363291 303 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 PEX12P1-201ENST00000400284 1048 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AL391422.1-201ENST00000402155 436 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.73□□□□□ -1.49
PDGFRAP16234 MTND2P40-201ENST00000436718 841 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 RANP1-206ENST00000455094 651 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 RPL35AP19-201ENST00000469425 329 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 RN7SL184P-201ENST00000488308 297 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.73□□□□□ -1.49
PDGFRAP16234 ATP5LP3-201ENST00000514223 304 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 RN7SKP99-201ENST00000517028 307 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFRAP16234 AC005000.1-201ENST00000536192 288 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFRAP16234 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFRAP16234 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 AC010487.1-201ENST00000594408 1172 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.73□□□□□ -1.49
PDGFRAP16234 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.73□□□□□ -1.49
PDGFRAP16234 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 AP000894.4-201ENST00000610185 483 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AC079395.2-201ENST00000610982 737 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 AC022467.1-201ENST00000614738 749 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 uc_338.7-201ENST00000621834 124 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDGFRAP16234 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.73□□□□□ -1.49
PDGFRAP16234 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.72□□□□□ -1.49
PDGFRAP16234 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 RN7SKP160-201ENST00000363804 340 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 RNU1-146P-201ENST00000364015 165 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 AL353625.1-202ENST00000366273 571 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFRAP16234 SNORA16A-201ENST00000384342 137 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 PPIAP9-201ENST00000403866 498 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 Z93019.1-201ENST00000416450 973 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFRAP16234 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFRAP16234 AL392003.1-201ENST00000434394 243 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 XKRYP6-201ENST00000440468 1116 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 XKRYP3-201ENST00000442113 1116 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 AC108751.3-201ENST00000461814 1020 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFRAP16234 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFRAP16234 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDGFRAP16234 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFRAP16234 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.72□□□□□ -1.49
PDGFRAP16234 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 AC015720.2-201ENST00000567709 334 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 AL122125.1-201ENST00000616999 600 ntBASIC5.72□□□□□ -1.49
PDGFRAP16234 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFRAP16234 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFRAP16234 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.71□□□□□ -1.49
PDGFRAP16234 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFRAP16234 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFRAP16234 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
PDGFRAP16234 CASC19-248ENST00000641674 1356 ntBASIC5.71□□□□□ -1.5
PDGFRAP16234 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFRAP16234 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms