Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.27□□□□□ -1.41
TOP1P11387 RNA5SP373-201ENST00000517271 95 ntBASIC6.27□□□□□ -1.41
TOP1P11387 AC079064.1-201ENST00000528365 362 ntBASIC6.27□□□□□ -1.41
TOP1P11387 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.27□□□□□ -1.41
TOP1P11387 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.27□□□□□ -1.41
TOP1P11387 AC090286.3-201ENST00000573133 187 ntBASIC6.27□□□□□ -1.41
TOP1P11387 RNU6-84P-201ENST00000607737 102 ntBASIC6.27□□□□□ -1.41
TOP1P11387 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP1P11387 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP1P11387 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP1P11387 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP1P11387 CYP4F35P-202ENST00000636121 390 ntBASIC6.27□□□□□ -1.41
TOP1P11387 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP1P11387 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TOP1P11387 PROS2P-201ENST00000474651 1951 ntBASIC6.27□□□□□ -1.41
TOP1P11387 TET1P1-201ENST00000426627 2301 ntBASIC6.27□□□□□ -1.41
TOP1P11387 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP1P11387 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP1P11387 AC100757.1-201ENST00000616872 1835 ntBASIC6.27□□□□□ -1.41
TOP1P11387 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP1P11387 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP1P11387 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TOP1P11387 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 C4BPAP1-201ENST00000415474 1893 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 AC011493.1-201ENST00000596753 1632 ntBASIC6.26□□□□□ -1.41
TOP1P11387 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TOP1P11387 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 RNA5SP187-201ENST00000384400 119 ntBASIC6.26□□□□□ -1.41
TOP1P11387 PEX12P1-201ENST00000400284 1048 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 AL627308.1-201ENST00000435693 821 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.26□□□□□ -1.41
TOP1P11387 FAR2P1-206ENST00000449736 709 ntBASIC6.26□□□□□ -1.41
TOP1P11387 RN7SL222P-201ENST00000476452 299 ntBASIC6.26□□□□□ -1.41
TOP1P11387 DEFB109A-201ENST00000482450 265 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AC058823.1-201ENST00000485315 474 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AC015864.1-201ENST00000496512 544 ntBASIC6.26□□□□□ -1.41
TOP1P11387 SNORA70.11-201ENST00000515987 138 ntBASIC6.26□□□□□ -1.41
TOP1P11387 SNORA70.13-201ENST00000516116 138 ntBASIC6.26□□□□□ -1.41
TOP1P11387 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.26□□□□□ -1.41
TOP1P11387 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.26□□□□□ -1.41
TOP1P11387 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 AC013244.1-201ENST00000604279 193 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AC126915.2-201ENST00000610957 190 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.26□□□□□ -1.41
TOP1P11387 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.26□□□□□ -1.41
TOP1P11387 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.26□□□□□ -1.41
TOP1P11387 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.26□□□□□ -1.41
TOP1P11387 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.26□□□□□ -1.41
TOP1P11387 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TOP1P11387 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.26□□□□□ -1.41
TOP1P11387 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP1P11387 DDX18P6-201ENST00000450119 1997 ntBASIC6.26□□□□□ -1.41
TOP1P11387 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TOP1P11387 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TOP1P11387 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.25□□□□□ -1.41
TOP1P11387 HSPA8P15-201ENST00000401676 786 ntBASIC6.25□□□□□ -1.41
TOP1P11387 RNU4-34P-201ENST00000410431 124 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AL136231.1-201ENST00000429407 730 ntBASIC6.25□□□□□ -1.41
TOP1P11387 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.25□□□□□ -1.41
TOP1P11387 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP1P11387 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP1P11387 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TOP1P11387 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 RN7SL423P-201ENST00000486202 304 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP1P11387 AC093763.2-201ENST00000505334 1223 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.25□□□□□ -1.41
TOP1P11387 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP1P11387 AC016180.1-201ENST00000567945 403 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AC019322.1-201ENST00000571869 389 ntBASIC6.25□□□□□ -1.41
TOP1P11387 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.25□□□□□ -1.41
TOP1P11387 AC010632.3-201ENST00000611377 369 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AC244107.2-201ENST00000611773 76 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AC016769.4-201ENST00000616893 535 ntBASIC6.25□□□□□ -1.41
TOP1P11387 AC090527.3-201ENST00000619041 548 ntBASIC6.25□□□□□ -1.41
TOP1P11387 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.25□□□□□ -1.41
TOP1P11387 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
TOP1P11387 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.25□□□□□ -1.41
TOP1P11387 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TOP1P11387 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms