Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HOXC6P09630 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
HOXC6P09630 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC6P09630 AC022417.1-201ENST00000624768 1303 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC6P09630 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 AL121886.1-201ENST00000358609 435 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC6P09630 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC6P09630 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC6P09630 RPL23AP18-201ENST00000416139 468 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC104837.2-201ENST00000427236 424 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC6P09630 RPS3AP53-201ENST00000454716 778 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC092324.1-201ENST00000468671 324 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 CEACAMP10-202ENST00000495431 496 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC093890.1-201ENST00000502554 540 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 ST13P12-201ENST00000508958 1094 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 COL6A4P2-205ENST00000509855 506 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC6P09630 AC067805.1-201ENST00000559344 470 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC6P09630 AC018558.5-201ENST00000565840 952 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC060780.2-201ENST00000589047 198 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC6P09630 AC007423.1-201ENST00000605009 627 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 AC243960.7-201ENST00000623532 707 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC6P09630 INTS6P1-201ENST00000504674 2530 ntBASIC6.11□□□□□ -1.43
HOXC6P09630 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
HOXC6P09630 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC6P09630 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC6P09630 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 THAP12P4-201ENST00000528321 2266 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC6P09630 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC6P09630 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
HOXC6P09630 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC6P09630 KYNUP3-201ENST00000574386 1341 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 SNURFL-201ENST00000309296 343 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 RNA5SP123-201ENST00000363244 119 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 RNA5SP87-201ENST00000384155 118 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 NUDT19P3-201ENST00000404698 555 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 NFYAP1-201ENST00000431953 972 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 FCF1P7-201ENST00000451185 558 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXC6P09630 AZGP1P2-201ENST00000454506 345 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 TPRKBP1-201ENST00000456243 481 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 RPL7P40-201ENST00000481703 745 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC6P09630 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 SETP12-201ENST00000514068 805 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 OR5AM1P-201ENST00000532136 1032 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC6P09630 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXC6P09630 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC6P09630 AP001267.4-201ENST00000602598 545 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 AC087783.2-201ENST00000605070 562 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC6P09630 AC063952.1-203ENST00000634410 658 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXC6P09630 AC006600.2-201ENST00000624834 2506 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 HSPD1P7-201ENST00000447985 1686 ntBASIC6.1□□□□□ -1.43
HOXC6P09630 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC6P09630 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC6P09630 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC6P09630 AL078621.3-201ENST00000623707 2042 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXC6P09630 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC6P09630 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXC6P09630 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HOXC6P09630 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC6P09630 NR1H5P-201ENST00000452683 1377 ntBASIC6.09□□□□□ -1.43
HOXC6P09630 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms