Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXC4P09017 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC4P09017 AC127381.1-201ENST00000555979 939 ntBASIC5.24□□□□□ -1.57
HOXC4P09017 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC4P09017 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXC4P09017 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXC4P09017 AC009027.1-201ENST00000604510 479 ntBASIC5.24□□□□□ -1.57
HOXC4P09017 TAS2R6P-201ENST00000605022 826 ntBASIC5.24□□□□□ -1.57
HOXC4P09017 RPSAP73-201ENST00000614820 330 ntBASIC5.24□□□□□ -1.57
HOXC4P09017 AC068870.2-201ENST00000620635 389 ntBASIC5.24□□□□□ -1.57
HOXC4P09017 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HOXC4P09017 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC4P09017 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXC4P09017 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC4P09017 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HOXC4P09017 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXC4P09017 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 OR9K1P-202ENST00000641111 3217 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 PANDAR-201ENST00000629595 1506 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXC4P09017 RPL23P2-201ENST00000320371 421 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXC4P09017 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXC4P09017 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AC017019.1-201ENST00000426129 261 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 PTMAP6-201ENST00000439110 327 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC104634.1-201ENST00000452720 462 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXC4P09017 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AC109462.1-201ENST00000491087 368 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXC4P09017 GTF2F2P1-201ENST00000511083 675 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 FTH1P11-201ENST00000517577 551 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC134349.2-201ENST00000535136 910 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC090286.3-201ENST00000573133 187 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC006116.3-201ENST00000592968 361 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXC4P09017 AL139041.1-201ENST00000605480 610 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC009163.6-201ENST00000612367 342 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 AC099494.2-201ENST00000623371 978 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 CASC19-222ENST00000641321 1173 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AC120036.2-201ENST00000509729 1474 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXC4P09017 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AC114774.1-201ENST00000507410 1770 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXC4P09017 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AL359955.1-201ENST00000455242 3275 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 AC004076.2-201ENST00000620532 3323 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 HSPA8P18-201ENST00000439846 1928 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
HOXC4P09017 AC079298.1-201ENST00000625026 1619 ntBASIC5.23□□□□□ -1.57
HOXC4P09017 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXC4P09017 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC4P09017 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 AC092747.4-201ENST00000620519 1861 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC4P09017 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
HOXC4P09017 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 U3.3-201ENST00000362986 216 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 SNORA58B-201ENST00000364259 136 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 MIR105-1-201ENST00000385222 81 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXC4P09017 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC4P09017 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 AL121878.1-201ENST00000418638 859 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 RPS4XP16-201ENST00000427198 791 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AC124944.2-201ENST00000429866 1242 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms