Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.93□□□□□ -1.46
TPM3P06753 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.93□□□□□ -1.46
TPM3P06753 AC084759.1-201ENST00000561168 290 ntBASIC5.93□□□□□ -1.46
TPM3P06753 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.93□□□□□ -1.46
TPM3P06753 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM3P06753 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM3P06753 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM3P06753 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM3P06753 MIR8069-1-201ENST00000616627 86 ntBASIC5.93□□□□□ -1.46
TPM3P06753 MIR8069-2-201ENST00000621412 86 ntBASIC5.93□□□□□ -1.46
TPM3P06753 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM3P06753 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM3P06753 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.93□□□□□ -1.46
TPM3P06753 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM3P06753 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM3P06753 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM3P06753 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM3P06753 AC023421.1-201ENST00000590535 1785 ntBASIC5.93□□□□□ -1.46
TPM3P06753 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 IFIT1P1-201ENST00000400497 1449 ntBASIC5.92□□□□□ -1.46
TPM3P06753 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 MRE11P1-201ENST00000464884 2127 ntBASIC5.92□□□□□ -1.46
TPM3P06753 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.92□□□□□ -1.46
TPM3P06753 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TPM3P06753 RNA5SP273-201ENST00000362484 113 ntBASIC5.92□□□□□ -1.46
TPM3P06753 RNU1-150P-201ENST00000362491 162 ntBASIC5.92□□□□□ -1.46
TPM3P06753 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM3P06753 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM3P06753 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM3P06753 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 NPM1P33-201ENST00000438918 872 ntBASIC5.92□□□□□ -1.46
TPM3P06753 AC068491.1-201ENST00000449539 1241 ntBASIC5.92□□□□□ -1.46
TPM3P06753 RN7SL515P-201ENST00000463999 297 ntBASIC5.92□□□□□ -1.46
TPM3P06753 AC098818.1-201ENST00000478593 252 ntBASIC5.92□□□□□ -1.46
TPM3P06753 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
TPM3P06753 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM3P06753 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 RNA5SP438-201ENST00000516561 112 ntBASIC5.92□□□□□ -1.46
TPM3P06753 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM3P06753 AP002373.2-201ENST00000541631 1060 ntBASIC5.92□□□□□ -1.46
TPM3P06753 AC079905.1-201ENST00000549280 475 ntBASIC5.92□□□□□ -1.46
TPM3P06753 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM3P06753 AL845552.1-201ENST00000556820 323 ntBASIC5.92□□□□□ -1.46
TPM3P06753 PPATP2-201ENST00000605635 508 ntBASIC5.92□□□□□ -1.46
TPM3P06753 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM3P06753 SCN1A-220ENST00000641603 12506 ntBASIC5.92□□□□□ -1.46
TPM3P06753 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 NEPNP-201ENST00000404786 1371 ntBASIC5.92□□□□□ -1.46
TPM3P06753 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM3P06753 CASC19-221ENST00000641309 1382 ntBASIC5.92□□□□□ -1.46
TPM3P06753 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM3P06753 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM3P06753 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TPM3P06753 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.91□□□□□ -1.46
TPM3P06753 OR6D1P-201ENST00000436165 939 ntBASIC5.91□□□□□ -1.46
TPM3P06753 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM3P06753 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM3P06753 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM3P06753 AL672138.1-201ENST00000450604 1015 ntBASIC5.91□□□□□ -1.46
TPM3P06753 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM3P06753 AC135999.1-201ENST00000478962 479 ntBASIC5.91□□□□□ -1.46
TPM3P06753 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM3P06753 RNU6-615P-201ENST00000516065 106 ntBASIC5.91□□□□□ -1.46
TPM3P06753 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM3P06753 DPPA2P4-201ENST00000563717 878 ntBASIC5.91□□□□□ -1.46
TPM3P06753 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM3P06753 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM3P06753 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM3P06753 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TPM3P06753 NR1H5P-201ENST00000452683 1377 ntBASIC5.91□□□□□ -1.46
TPM3P06753 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM3P06753 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM3P06753 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.9□□□□□ -1.46
TPM3P06753 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TPM3P06753 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 AC005294.1-201ENST00000355509 281 ntBASIC5.9□□□□□ -1.46
TPM3P06753 RNA5SP477-201ENST00000362639 119 ntBASIC5.9□□□□□ -1.46
TPM3P06753 RNA5SP232-201ENST00000364144 119 ntBASIC5.9□□□□□ -1.46
TPM3P06753 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TPM3P06753 RPS3AP2-201ENST00000407190 754 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms