Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
COL4A1P02462 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A1P02462 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
COL4A1P02462 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A1P02462 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 ATP5HP3-201ENST00000396994 486 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 AL645608.4-201ENST00000423619 154 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 MTND2P40-201ENST00000436718 841 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 GSTA7P-201ENST00000438425 448 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A1P02462 RPSAP51-201ENST00000497462 645 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.17□□□□□ -1.42
COL4A1P02462 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 LINC02035-201ENST00000610128 5476 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 AC010132.2-201ENST00000295493 1043 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 AC090018.1-201ENST00000434369 367 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 CYCSP42-201ENST00000450823 238 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A1P02462 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A1P02462 SCARNA22-201ENST00000503991 125 ntBASIC6.17□□□□□ -1.42
COL4A1P02462 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.17□□□□□ -1.42
COL4A1P02462 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A1P02462 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A1P02462 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A1P02462 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL4A1P02462 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A1P02462 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL4A1P02462 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL4A1P02462 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A1P02462 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.16□□□□□ -1.42
COL4A1P02462 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COL4A1P02462 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A1P02462 NLRP3P1-201ENST00000622303 1785 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
COL4A1P02462 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A1P02462 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A1P02462 P2RY10P2-201ENST00000416730 913 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A1P02462 FABP7P1-201ENST00000424004 391 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 RN7SL443P-201ENST00000464331 290 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.16□□□□□ -1.42
COL4A1P02462 PRELID3BP5-201ENST00000508612 460 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AC027369.5-201ENST00000533838 755 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A1P02462 EDDM3DP-201ENST00000554692 434 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AL512782.1-201ENST00000603093 364 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AC007786.3-201ENST00000615154 596 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AC108359.1-201ENST00000616451 1211 ntBASIC6.16□□□□□ -1.42
COL4A1P02462 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.16□□□□□ -1.42
COL4A1P02462 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A1P02462 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL4A1P02462 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
COL4A1P02462 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A1P02462 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A1P02462 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A1P02462 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A1P02462 RPL7AP49-201ENST00000429522 581 ntBASIC6.15□□□□□ -1.42
COL4A1P02462 AL591438.1-201ENST00000433508 581 ntBASIC6.15□□□□□ -1.42
COL4A1P02462 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A1P02462 PRPF38AP2-201ENST00000438179 851 ntBASIC6.15□□□□□ -1.42
COL4A1P02462 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A1P02462 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A1P02462 TPT1P13-201ENST00000449760 499 ntBASIC6.15□□□□□ -1.42
COL4A1P02462 AC136777.2-201ENST00000522979 358 ntBASIC6.15□□□□□ -1.42
COL4A1P02462 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A1P02462 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A1P02462 uc_338.7-201ENST00000621834 124 ntBASIC6.15□□□□□ -1.42
COL4A1P02462 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A1P02462 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A1P02462 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.15□□□□□ -1.43
COL4A1P02462 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A1P02462 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A1P02462 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.15□□□□□ -1.43
COL4A1P02462 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms