Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.46□□□□□ -1.54
LDLRP01130 CBX1P2-201ENST00000453841 458 ntBASIC5.46□□□□□ -1.54
LDLRP01130 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.46□□□□□ -1.54
LDLRP01130 AC093270.2-201ENST00000486157 792 ntBASIC5.46□□□□□ -1.54
LDLRP01130 OR9N1P-201ENST00000491296 333 ntBASIC5.46□□□□□ -1.54
LDLRP01130 DUTP7-201ENST00000507982 486 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.46□□□□□ -1.54
LDLRP01130 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.46□□□□□ -1.54
LDLRP01130 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.46□□□□□ -1.54
LDLRP01130 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LDLRP01130 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
LDLRP01130 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.46□□□□□ -1.54
LDLRP01130 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.46□□□□□ -1.54
LDLRP01130 FO393422.1-201ENST00000603908 708 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LDLRP01130 RPL21P136-201ENST00000605378 396 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.46□□□□□ -1.54
LDLRP01130 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.46□□□□□ -1.54
LDLRP01130 AC079395.2-201ENST00000610982 737 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AL162574.1-201ENST00000615702 950 ntBASIC5.46□□□□□ -1.54
LDLRP01130 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LDLRP01130 AC037198.3-201ENST00000616754 526 ntBASIC5.46□□□□□ -1.54
LDLRP01130 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LDLRP01130 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 AC109780.1-201ENST00000451768 1344 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AC117409.1-201ENST00000470499 1310 ntBASIC5.46□□□□□ -1.54
LDLRP01130 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LDLRP01130 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.46□□□□□ -1.54
LDLRP01130 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LDLRP01130 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 MAPK10-328ENST00000641553 4009 ntBASIC5.45□□□□□ -1.54
LDLRP01130 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.45□□□□□ -1.54
LDLRP01130 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 AL133482.1-201ENST00000415988 498 ntBASIC5.45□□□□□ -1.54
LDLRP01130 VN1R31P-201ENST00000417498 730 ntBASIC5.45□□□□□ -1.54
LDLRP01130 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 MTND2P9-201ENST00000422293 931 ntBASIC5.45□□□□□ -1.54
LDLRP01130 SDR42E1P3-201ENST00000438345 502 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AL359265.1-201ENST00000440296 795 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 ZNF619P1-201ENST00000446539 752 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AC073909.1-201ENST00000447112 999 ntBASIC5.45□□□□□ -1.54
LDLRP01130 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 AC004129.2-201ENST00000457229 287 ntBASIC5.45□□□□□ -1.54
LDLRP01130 SIAH1P1-201ENST00000479411 923 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AC108693.1-201ENST00000496068 432 ntBASIC5.45□□□□□ -1.54
LDLRP01130 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 SNORA70.20-201ENST00000516848 126 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.45□□□□□ -1.54
LDLRP01130 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.45□□□□□ -1.54
LDLRP01130 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 MIR4776-2-201ENST00000580204 80 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.45□□□□□ -1.54
LDLRP01130 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 MIR6748-201ENST00000610433 71 ntBASIC5.45□□□□□ -1.54
LDLRP01130 AP000720.1-201ENST00000625091 483 ntBASIC5.45□□□□□ -1.54
LDLRP01130 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LDLRP01130 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.45□□□□□ -1.54
LDLRP01130 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 AL031595.2-201ENST00000624215 19071 ntBASIC5.45□□□□□ -1.54
LDLRP01130 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LDLRP01130 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.45□□□□□ -1.54
LDLRP01130 AC093909.5-201ENST00000621839 1799 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 AC027088.4-201ENST00000611559 1947 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AP004607.3-201ENST00000530354 3915 ntBASIC5.44□□□□□ -1.54
LDLRP01130 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms