Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC090804.1-201ENST00000448870 490 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AP000797.2-201ENST00000475768 606 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AC093827.1-201ENST00000480094 861 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 PFN1P8-201ENST00000497012 543 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 RFPL4AP3-201ENST00000515267 345 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 RNA5SP340-201ENST00000517132 107 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC100784.1-201ENST00000522790 310 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC027369.2-201ENST00000528030 440 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AC011270.1-201ENST00000558606 583 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AC090079.2-201ENST00000575289 768 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC233702.9-201ENST00000581528 203 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 ADAD1P2-201ENST00000588476 646 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AP002884.5-201ENST00000595053 1132 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AC079315.1-201ENST00000602952 623 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.21□□□□□ -1.58
CLPTM1O96005 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.21□□□□□ -1.58
CLPTM1O96005 AL121890.2-201ENST00000617644 465 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.21□□□□□ -1.58
CLPTM1O96005 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.21□□□□□ -1.58
CLPTM1O96005 RBPJP7-201ENST00000442803 1447 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 OR51C1P-202ENST00000641159 1444 ntBASIC5.21□□□□□ -1.58
CLPTM1O96005 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLPTM1O96005 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AC112255.1-201ENST00000624070 2493 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 MUC2-202ENST00000613187 4845 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 OR56A4-201ENST00000330728 1209 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 RNU4-44P-201ENST00000363050 141 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AC013470.3-201ENST00000420252 1194 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 RPL12P12-201ENST00000424633 501 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 AC002069.1-201ENST00000429649 1159 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.2□□□□□ -1.58
CLPTM1O96005 RPL19P16-201ENST00000433839 588 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 MTCO3P43-201ENST00000440974 771 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AL591363.1-201ENST00000450091 483 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 OR6C72P-201ENST00000451403 892 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AL356390.1-201ENST00000455684 397 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AC025181.1-201ENST00000477507 416 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 ATP5LP5-201ENST00000483050 299 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.2□□□□□ -1.58
CLPTM1O96005 RNU6-467P-201ENST00000517027 110 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLPTM1O96005 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.2□□□□□ -1.58
CLPTM1O96005 NPM1P45-201ENST00000583151 559 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AL391262.2-201ENST00000622466 494 ntBASIC5.2□□□□□ -1.58
CLPTM1O96005 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.2□□□□□ -1.58
CLPTM1O96005 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.2□□□□□ -1.58
CLPTM1O96005 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms