Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 OR9K1P-202ENST00000641111 3217 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 MIR105-1-201ENST00000385222 81 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC013410.1-201ENST00000436223 1232 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 RPL34P20-201ENST00000442771 351 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC011742.2-201ENST00000443818 352 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 HMGN2P25-201ENST00000486956 268 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 GTF2F2P1-201ENST00000511083 675 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 IGKV2D-10-201ENST00000520194 281 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 PMS2P3-207ENST00000529061 717 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 ASB8-204ENST00000536071 568 ntTSL 4 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC011497.2-201ENST00000600255 639 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC135803.1-201ENST00000608748 565 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC022306.3-201ENST00000619930 550 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AC023510.2-201ENST00000622162 746 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 NCOA4P3-201ENST00000513203 1877 ntBASIC8.08□□□□□ -1.12
RAPGEF3O95398 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RAPGEF3O95398 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.08□□□□□ -1.12
RAPGEF3O95398 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC007996.1-201ENST00000620414 2821 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC144833.1-201ENST00000567953 4089 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 RNA5SP332-201ENST00000391063 115 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 AL354868.1-201ENST00000417077 482 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC069213.2-201ENST00000420238 366 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC007568.1-201ENST00000422912 471 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 AJ239321.1-201ENST00000424255 564 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 RPL5P25-201ENST00000441148 775 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 OR10D4P-201ENST00000525892 951 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 GCSHP4-201ENST00000538792 439 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 BGLT3-201ENST00000564523 994 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 MIR4284-201ENST00000578924 81 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 AC096586.2-201ENST00000610260 441 ntBASIC8.07□□□□□ -1.12
RAPGEF3O95398 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RAPGEF3O95398 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RAPGEF3O95398 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RAPGEF3O95398 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RAPGEF3O95398 AC009480.2-201ENST00000422916 432 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms