Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MIR6793-201ENST00000612376 63 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC025016.1-201ENST00000616746 682 ntBASIC5.18□□□□□ -1.58
SSX4O60224 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSX4O60224 AP006248.3-201ENST00000623580 594 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSX4O60224 AC007342.5-201ENST00000571340 2142 ntBASIC5.18□□□□□ -1.58
SSX4O60224 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX4O60224 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SSX4O60224 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSX4O60224 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SSX4O60224 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 RNU6-1263P-201ENST00000384601 106 ntBASIC5.17□□□□□ -1.58
SSX4O60224 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSX4O60224 Z86062.1-201ENST00000406773 777 ntBASIC5.17□□□□□ -1.58
SSX4O60224 NENFP1-201ENST00000419476 466 ntBASIC5.17□□□□□ -1.58
SSX4O60224 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX4O60224 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 RPL12P18-201ENST00000437175 325 ntBASIC5.17□□□□□ -1.58
SSX4O60224 TUBB4BP6-201ENST00000437576 479 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 AC007000.2-201ENST00000442564 487 ntBASIC5.17□□□□□ -1.58
SSX4O60224 CUBNP2-201ENST00000443534 1139 ntBASIC5.17□□□□□ -1.58
SSX4O60224 TRIM60P16-201ENST00000444048 694 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 ZNF619P1-201ENST00000446539 752 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX4O60224 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 AC034244.2-201ENST00000514668 858 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SSX4O60224 AC027544.3-201ENST00000535082 757 ntBASIC5.17□□□□□ -1.58
SSX4O60224 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX4O60224 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX4O60224 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 SNORD39.2-201ENST00000579995 76 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 AC005244.1-201ENST00000582566 339 ntBASIC5.17□□□□□ -1.58
SSX4O60224 MTCO2P22-201ENST00000603246 681 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX4O60224 AL133481.2-203ENST00000607558 139 ntBASIC5.17□□□□□ -1.58
SSX4O60224 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 AL356608.1-201ENST00000610034 820 ntBASIC5.17□□□□□ -1.58
SSX4O60224 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 AL355974.3-201ENST00000617383 467 ntBASIC5.17□□□□□ -1.58
SSX4O60224 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 AL136228.1-201ENST00000622221 319 ntBASIC5.17□□□□□ -1.58
SSX4O60224 AP002371.2-201ENST00000624450 503 ntBASIC5.17□□□□□ -1.58
SSX4O60224 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX4O60224 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX4O60224 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX4O60224 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SSX4O60224 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.16□□□□□ -1.58
SSX4O60224 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX4O60224 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX4O60224 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX4O60224 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX4O60224 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX4O60224 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SSX4O60224 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.16□□□□□ -1.58
SSX4O60224 RNA5SP242-201ENST00000364171 118 ntBASIC5.16□□□□□ -1.58
SSX4O60224 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX4O60224 AL391422.1-201ENST00000402155 436 ntBASIC5.16□□□□□ -1.58
SSX4O60224 MIR1203-201ENST00000408812 85 ntBASIC5.16□□□□□ -1.58
SSX4O60224 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.16□□□□□ -1.58
SSX4O60224 BTF3P9-201ENST00000418784 283 ntBASIC5.16□□□□□ -1.58
SSX4O60224 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.16□□□□□ -1.58
SSX4O60224 AL035660.1-201ENST00000422041 222 ntBASIC5.16□□□□□ -1.58
SSX4O60224 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.16□□□□□ -1.58
SSX4O60224 AC009784.1-201ENST00000426484 460 ntBASIC5.16□□□□□ -1.58
SSX4O60224 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.16□□□□□ -1.58
SSX4O60224 PCBP2P1-201ENST00000437262 977 ntBASIC5.16□□□□□ -1.58
SSX4O60224 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.16□□□□□ -1.58
SSX4O60224 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.16□□□□□ -1.58
SSX4O60224 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms