Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 MIR6798-201ENST00000612887 67 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 FRG1EP-201ENST00000634469 770 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL603750.1-201ENST00000624216 1717 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC144833.1-201ENST00000567953 4089 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 HSPA8P18-201ENST00000439846 1928 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 PWAR1-201ENST00000624188 2414 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL133482.1-201ENST00000415988 498 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 REREP1Y-201ENST00000422655 198 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 REREP2Y-201ENST00000439103 200 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 RN7SL222P-201ENST00000476452 299 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC109462.1-201ENST00000491087 368 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 GLUD1P3-202ENST00000508551 200 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 HMGB1P44-201ENST00000508597 572 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 SEPT10P1-201ENST00000517342 1162 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 CDH12P4-201ENST00000517835 295 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 CDH12P3-201ENST00000517935 295 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 CDH12P1-201ENST00000518435 295 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 OR4A46P-201ENST00000527255 933 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 RN7SL708P-201ENST00000580952 299 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC010632.3-201ENST00000611377 369 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC131971.1-201ENST00000332881 1482 ntBASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMX2-CTNND1H3BSU7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC006206.1-201ENST00000544842 3387 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 RNA5SP91-201ENST00000390902 119 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 GABARAPL3-201ENST00000412799 354 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL121878.1-201ENST00000418638 859 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC108075.1-201ENST00000424692 529 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 DSTNP5-201ENST00000427921 523 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL136231.1-201ENST00000429407 730 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 ATP5LP5-201ENST00000483050 299 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPS7P6-201ENST00000485777 579 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 GAPDHP62-201ENST00000515313 990 ntBASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.3□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms