Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC109446.4-201ENST00000623235 2755 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 MIR551A-201ENST00000385042 96 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 GAPDHP15-201ENST00000398586 975 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 RNU4-34P-201ENST00000410431 124 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 CASKP1-201ENST00000412870 582 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AL158827.1-201ENST00000416300 391 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC006335.2-201ENST00000437993 330 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 PDCL3P4-201ENST00000489621 720 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 DUTP1-201ENST00000493631 470 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 RN7SKP99-201ENST00000517028 307 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 HSPE1P2-201ENST00000554777 306 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 NANOGP3-201ENST00000605855 286 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 Z95327.3-201ENST00000610385 572 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AL359513.1-201ENST00000614364 557 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 AL590763.1-201ENST00000398297 1545 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.53□□□□□ -1.52
SPASTQ9UBP0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SPASTQ9UBP0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 PEX12P1-201ENST00000400284 1048 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AC019185.1-201ENST00000442718 389 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 VDAC2P4-201ENST00000452925 711 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AGGF1P7-201ENST00000562369 913 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AC012616.1-201ENST00000600294 197 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AC092944.2-201ENST00000605443 889 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 MIR6719-201ENST00000622428 87 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AC003985.2-201ENST00000562268 1669 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 MFSD8-239ENST00000641590 2479 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SPASTQ9UBP0 AL031595.2-201ENST00000624215 19071 ntBASIC5.52□□□□□ -1.53
SPASTQ9UBP0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.51□□□□□ -1.53
SPASTQ9UBP0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPASTQ9UBP0 AC235565.1-201ENST00000456962 1325 ntBASIC5.51□□□□□ -1.53
SPASTQ9UBP0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SPASTQ9UBP0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SPASTQ9UBP0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
SPASTQ9UBP0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.51□□□□□ -1.53
SPASTQ9UBP0 RNU1-19P-201ENST00000363306 165 ntBASIC5.51□□□□□ -1.53
SPASTQ9UBP0 RNA5SP234-201ENST00000363916 119 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms