Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RNA5SP308-201ENST00000362532 115 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RN7SKP130-201ENST00000364924 301 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 SNORD116-2-201ENST00000384274 95 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 SNORD116-6-201ENST00000384711 96 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AL391419.1-201ENST00000398901 1275 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 OR7E156P-201ENST00000400303 464 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AL359092.1-201ENST00000417156 265 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 OR5M12P-201ENST00000423388 929 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC092651.1-201ENST00000426110 312 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RPL7P29-201ENST00000437151 728 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 PFN1P11-201ENST00000445829 389 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RPL26P30-201ENST00000453533 435 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 MRPL35P4-201ENST00000453682 566 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RPS27AP3-201ENST00000453803 454 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RPS27AP2-201ENST00000457576 465 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 RPL23AP37-201ENST00000479658 549 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC090058.1-201ENST00000498788 435 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC092593.2-201ENST00000513866 913 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC007834.2-201ENST00000536310 343 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 ZNF321P-202ENST00000550843 495 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 MIR548Y-201ENST00000582739 110 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC079315.1-201ENST00000602952 623 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC012368.3-201ENST00000604190 219 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC009948.4-201ENST00000604692 675 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC027559.1-201ENST00000636288 271 ntBASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCM2LQ9NUG4 AC023245.2-201ENST00000530760 2978 ntBASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 HSPD1P9-201ENST00000420325 1636 ntBASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 AC010894.1-201ENST00000313760 361 ntBASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCM2LQ9NUG4 MIR137-201ENST00000385223 102 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms