Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC105399.1-202ENST00000447303 205 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 RBMY2TP-201ENST00000451162 947 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC074087.1-201ENST00000512059 724 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC092709.1-201ENST00000521355 1045 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC138832.1-201ENST00000522871 556 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AP001804.2-201ENST00000533932 910 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AL121839.1-201ENST00000556233 1185 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC005341.1-201ENST00000571086 708 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 MIR1273E-201ENST00000581165 102 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC010503.3-201ENST00000594355 540 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC026367.3-201ENST00000619032 590 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AP003400.3-201ENST00000624904 346 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LRRC40Q9H9A6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC002524.1-201ENST00000411687 547 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RPL12P43-201ENST00000420608 499 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC124944.2-201ENST00000429866 1242 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC090018.1-201ENST00000434369 367 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RPL12P18-201ENST00000437175 325 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RAB9AP5-201ENST00000437794 597 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RAB9AP2-201ENST00000443911 597 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RPL31P15-201ENST00000449770 338 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AL035090.1-201ENST00000454835 332 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC022133.1-201ENST00000490961 571 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RPS12P31-201ENST00000491419 398 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 RN7SKP34-201ENST00000516142 244 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC022360.1-201ENST00000521058 340 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC130364.2-201ENST00000528639 604 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 DUX4L52-201ENST00000549363 777 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC060766.1-201ENST00000590824 627 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 FO393422.1-201ENST00000603908 708 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AL158062.1-201ENST00000619632 745 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 AC233968.1-201ENST00000611212 1300 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 OR9K1P-202ENST00000641111 3217 ntBASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC40Q9H9A6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 RNA5SP319-201ENST00000362768 119 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 RNU1-146P-201ENST00000364015 165 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 SNORA16A-201ENST00000384342 137 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 RN7SKP286-201ENST00000410894 299 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms