Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 CASC19-222ENST00000641321 1173 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC129502.1-201ENST00000623261 1654 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 LINC02019-201ENST00000608605 2060 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 CASC19-246ENST00000641625 1606 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TRAIPQ9BWF2 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 USP9YP4-201ENST00000424401 1745 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AL390862.1-201ENST00000635467 1469 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC010894.1-201ENST00000313760 361 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 RNGTTP1-201ENST00000420965 728 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC007394.1-201ENST00000421941 531 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC233981.1-201ENST00000423224 461 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AL121916.1-201ENST00000429405 308 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 ATP5C1P1-201ENST00000441945 895 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 CEACAMP5-201ENST00000448037 961 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC022080.2-201ENST00000452932 533 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC010878.1-201ENST00000456500 1047 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 RN7SL393P-201ENST00000463588 296 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AP000805.1-201ENST00000471604 784 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC072039.1-201ENST00000477611 581 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 RN7SL259P-201ENST00000478499 253 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 HMGB1P44-201ENST00000508597 572 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 MTCYBP44-201ENST00000514835 823 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 MTND4LP31-201ENST00000514859 294 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 RNU6-1261P-201ENST00000517194 104 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC135983.3-201ENST00000528049 1226 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 MIR3157-201ENST00000578688 85 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC036176.3-201ENST00000602456 418 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC015819.1-201ENST00000613588 663 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC243756.2-201ENST00000618406 463 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 AC091544.5-201ENST00000620192 3815 ntBASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRAIPQ9BWF2 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms