Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AP005403.1-201ENST00000579720 229 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 MIR4502-201ENST00000580432 81 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AP005212.4-201ENST00000614206 710 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AP005431.1-201ENST00000618479 319 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 BX005214.3-202ENST00000619809 325 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC005899.6-201ENST00000620729 297 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AL390318.1-201ENST00000624564 687 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC111152.1-202ENST00000635848 339 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 MIPEPP2-201ENST00000422560 1819 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 BTBD10P1-201ENST00000549824 1352 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC007342.9-201ENST00000623877 1385 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC104966.1-201ENST00000467010 1464 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 COX6B1P3-201ENST00000312310 260 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RNA5SP273-201ENST00000362484 113 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RN7SKP250-201ENST00000363924 321 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RN7SKP153-201ENST00000365026 316 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AL034417.1-201ENST00000399343 800 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 OR5M12P-201ENST00000423388 929 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 BTF3P6-201ENST00000448054 499 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC135999.1-201ENST00000478962 479 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RN7SL568P-201ENST00000493069 298 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC018797.1-201ENST00000510791 255 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RNA5SP438-201ENST00000516561 112 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 HMGB1P42-201ENST00000532126 553 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC121758.1-202ENST00000556917 658 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RN7SL356P-201ENST00000582228 248 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC011500.1-201ENST00000601963 469 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC022001.1-201ENST00000605193 268 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AC091167.5-201ENST00000605689 894 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 SNORD91B-202ENST00000608459 222 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RN7SL544P-201ENST00000617232 284 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RN7SL763P-201ENST00000620922 284 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 HSPA8P18-201ENST00000439846 1928 ntBASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC28BQ9BUN5 Z95331.1-201ENST00000623075 23112 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC112198.2-201ENST00000426589 6996 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 OR7E101P-201ENST00000400428 513 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 MIR1203-201ENST00000408812 85 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 RN7SKP86-201ENST00000410454 332 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms