Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP2Q96SN8 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP2Q96SN8 HSPA8P14-201ENST00000552265 1805 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 BX284613.1-201ENST00000452221 1641 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 ZNF402P-201ENST00000404435 3100 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 RNA5SP123-201ENST00000363244 119 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC090018.1-201ENST00000434369 367 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC011753.3-201ENST00000443436 406 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC128716.1-201ENST00000475129 166 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 IGBP1P4-201ENST00000503202 879 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 GCSHP4-201ENST00000538792 439 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AC011453.2-201ENST00000603737 729 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 MIR6810-201ENST00000622701 70 ntBASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP2Q96SN8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AL645733.1-201ENST00000402250 217 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 RPL10P10-201ENST00000403509 664 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AP002530.1-201ENST00000405705 684 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 RN7SKP16-201ENST00000410180 299 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AC092017.2-201ENST00000427600 362 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AC002075.1-201ENST00000457396 676 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AC140172.1-201ENST00000502928 141 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 AC063976.2-201ENST00000425667 3556 ntBASIC6.09□□□□□ -1.43
CDK5RAP2Q96SN8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 RPL7AP49-201ENST00000429522 581 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 AL591438.1-201ENST00000433508 581 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 RPS3AP53-201ENST00000454716 778 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 RPS12P31-201ENST00000491419 398 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 RN7SL441P-201ENST00000492388 296 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 RPS4XP20-201ENST00000505751 772 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 AC011840.5-201ENST00000582125 771 ntBASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.09□□□□□ -1.44
CDK5RAP2Q96SN8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 AL731532.1-201ENST00000623972 4236 ntBASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP2Q96SN8 SNORA2.3-201ENST00000383920 135 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms