Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL122023.1-201ENST00000622847 530 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC004232.3-201ENST00000622977 525 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC010325.3-201ENST00000641084 394 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC079298.1-201ENST00000625026 1619 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 BRAFP1-201ENST00000445336 2703 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 RNU1-49P-201ENST00000363468 159 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RNA5SP77-201ENST00000365394 120 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RNA5SP279-201ENST00000365513 117 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR13C3-201ENST00000374781 1108 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RNU6-31P-201ENST00000384388 108 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AP002784.2-201ENST00000397300 549 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RNU2-17P-201ENST00000410290 190 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 DEFB130D-201ENST00000426866 237 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 MTND5P25-201ENST00000430499 799 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 RPL7P34-201ENST00000433316 712 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 USP24P1-201ENST00000433802 779 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 ARMC4P1-201ENST00000438905 707 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 ARF4P4-201ENST00000439608 520 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AL663074.2-201ENST00000440621 479 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RPS27P5-201ENST00000444247 244 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 POU5F1P5-201ENST00000445059 658 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC093166.3-201ENST00000448785 303 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RPL23AP60-201ENST00000450011 454 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 Z99714.1-201ENST00000450463 807 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC112187.1-201ENST00000455837 479 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RN7SL72P-201ENST00000460697 269 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 H3F3AP5-201ENST00000475267 429 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC112484.3-201ENST00000505910 329 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR4D12P-201ENST00000509361 911 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 MAST4-IT1-201ENST00000514241 658 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 CYCSP25-201ENST00000525280 316 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR10V3P-201ENST00000525712 725 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR8Q1P-201ENST00000526467 655 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC241377.1-201ENST00000619797 406 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 MIR6811-201ENST00000620409 58 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC026422.1-201ENST00000623961 452 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC002525.1-201ENST00000624392 1622 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 NAMPTP1-201ENST00000440465 2514 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR9K1P-202ENST00000641111 3217 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX18Q96RF0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 AC004076.2-201ENST00000620532 3323 ntBASIC5.54□□□□□ -1.52
SNX18Q96RF0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX18Q96RF0 HSPD1P7-201ENST00000447985 1686 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 U3.10-201ENST00000364459 214 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 SNORD116-2-201ENST00000384274 95 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms