Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 Z83820.1-201ENST00000456978 1499 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 MTHFD2P5-201ENST00000320415 844 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AL159987.1-201ENST00000347911 293 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 MIR130B-202ENST00000385018 82 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 RBBP4P5-201ENST00000398583 1266 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 RPL10P10-201ENST00000403509 664 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 RPSAP35-201ENST00000413753 818 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 COX5BP7-201ENST00000414780 274 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AL139158.1-201ENST00000424719 340 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4□□□□□ -1.77
AP1S3Q96PC3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 HSPE1P27-201ENST00000430808 296 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 GAPDHP48-201ENST00000436626 961 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AK5-208ENST00000478255 556 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 RPL23AP37-201ENST00000479658 549 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC113430.1-201ENST00000506872 718 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4□□□□□ -1.77
AP1S3Q96PC3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 RNA5SP96-201ENST00000516041 107 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 RNA5SP360-201ENST00000516555 118 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC021678.3-201ENST00000517893 476 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 AL356801.1-201ENST00000559320 294 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
AP1S3Q96PC3 MTCYBP13-201ENST00000578634 1093 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 AC108738.1-201ENST00000603703 237 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 AL390318.1-201ENST00000624564 687 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4□□□□□ -1.77
AP1S3Q96PC3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 XKRY2-202ENST00000623874 1581 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 XKRY-202ENST00000624960 1581 ntBASIC4□□□□□ -1.77
AP1S3Q96PC3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4□□□□□ -1.77
AP1S3Q96PC3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AP1S3Q96PC3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
AP1S3Q96PC3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 LINC01109-201ENST00000603837 3081 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 RNU1-19P-201ENST00000363306 165 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AL096711.1-201ENST00000404780 554 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 NENFP1-201ENST00000419476 466 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AL022331.1-201ENST00000429025 477 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 GAPDHP59-201ENST00000435908 267 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 PRPF38AP1-201ENST00000451976 933 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 RN7SL583P-201ENST00000475692 287 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 RPS3AP15-201ENST00000483874 781 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 RPL29P23-201ENST00000486188 442 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC022133.1-201ENST00000490961 571 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 RPS12P31-201ENST00000491419 398 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC009120.1-201ENST00000493458 473 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC016559.2-201ENST00000510759 359 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AC108673.3-201ENST00000609183 335 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 uc_338.31-201ENST00000615595 186 ntBASIC3.99□□□□□ -1.77
AP1S3Q96PC3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AP1S3Q96PC3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms