Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AP003396.4-201ENST00000527574 265 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 OR8X1P-201ENST00000534542 869 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 DUX4L52-201ENST00000549363 777 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AL356801.1-201ENST00000559320 294 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 SNORD39.2-201ENST00000579995 76 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 FAM106CP-201ENST00000582212 507 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AP001267.4-201ENST00000602598 545 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 SUMO2P14-201ENST00000604488 293 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 BX323046.1-201ENST00000610145 535 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC090506.2-201ENST00000624521 419 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC008432.1-201ENST00000615912 1320 ntBASIC6.44□□□□□ -1.38
HPS3Q969F9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HPS3Q969F9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS3Q969F9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC015799.1-201ENST00000622996 3122 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
HPS3Q969F9 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HPS3Q969F9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HPS3Q969F9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 RNU1-150P-201ENST00000362491 162 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AL034403.1-201ENST00000399414 885 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 LYPLA1P3-201ENST00000402650 695 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AC016739.1-201ENST00000405359 345 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AL355615.1-201ENST00000406187 641 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AL357752.1-201ENST00000412817 349 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.43□□□□□ -1.38
HPS3Q969F9 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC006065.1-201ENST00000422539 802 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC006994.1-201ENST00000438212 839 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 CYCSP20-201ENST00000473154 315 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 RPS17P11-201ENST00000474297 293 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AC079080.1-201ENST00000479841 822 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 SCARNA18.1-201ENST00000516330 83 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 MTCYBP19-201ENST00000517463 1124 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 HNRNPCP1-201ENST00000556181 766 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AL133481.2-203ENST00000607558 139 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AC015982.1-201ENST00000608113 465 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AL158062.1-201ENST00000619632 745 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.43□□□□□ -1.38
HPS3Q969F9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AC106754.1-201ENST00000562632 1513 ntBASIC6.43□□□□□ -1.38
HPS3Q969F9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HPS3Q969F9 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.43□□□□□ -1.38
HPS3Q969F9 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.43□□□□□ -1.38
HPS3Q969F9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.42□□□□□ -1.38
HPS3Q969F9 AC015689.2-201ENST00000528172 1738 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 AC097063.1-201ENST00000426714 1797 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HPS3Q969F9 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.42□□□□□ -1.38
HPS3Q969F9 U3.10-201ENST00000364459 214 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 RN7SKP275-201ENST00000364626 301 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 RNU6-354P-201ENST00000383862 107 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 RNU6-610P-201ENST00000384264 107 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.42□□□□□ -1.38
HPS3Q969F9 VN1R51P-201ENST00000411675 945 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms