Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LRRC37A14P-201ENST00000452297 462 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AL445665.1-202ENST00000452436 324 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 MTND6P2-201ENST00000512226 524 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 RBM22P12-201ENST00000567098 1255 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC008115.3-201ENST00000614874 549 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AL359742.1-201ENST00000622497 540 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC008079.2-201ENST00000623543 20396 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RNU6-1320P-201ENST00000390838 107 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RNU6-1269P-201ENST00000391139 107 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 HMGN1P20-201ENST00000411849 300 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC106901.1-201ENST00000425086 698 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 HSPE1P16-201ENST00000426640 348 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RPL7AP49-201ENST00000429522 581 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AL591438.1-201ENST00000433508 581 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 NPM1P48-201ENST00000436002 853 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC090804.1-201ENST00000448870 490 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 CBX1P2-201ENST00000453841 458 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RNU6-599P-201ENST00000459383 107 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RNU6-1193P-201ENST00000459461 107 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC107015.1-201ENST00000466902 747 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC092754.1-201ENST00000472975 479 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RN7SKP99-201ENST00000517028 307 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 CYCSP22-201ENST00000517555 339 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AP004607.2-201ENST00000533949 322 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 NANOGNBP2-201ENST00000544753 553 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RNU6-368P-201ENST00000620928 107 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AC010809.3-201ENST00000621310 641 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 RNU6-538P-201ENST00000622329 107 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 FRG1EP-201ENST00000634469 770 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.16□□□□□ -1.58
CLHC1Q8NHS4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLHC1Q8NHS4 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.15□□□□□ -1.58
CLHC1Q8NHS4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLHC1Q8NHS4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLHC1Q8NHS4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLHC1Q8NHS4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLHC1Q8NHS4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 BMS1P3-201ENST00000372011 932 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 MIR621-201ENST00000384919 96 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 CXADRP1-201ENST00000398098 1095 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 OR6E1P-201ENST00000414424 923 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC093155.2-201ENST00000420734 937 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 IPPKP1-201ENST00000422501 768 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms