Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 DUTP5-201ENST00000406790 469 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 VN1R21P-201ENST00000426703 765 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 TRGV7-201ENST00000427089 353 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC006466.1-201ENST00000438721 289 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AL389915.2-201ENST00000454576 441 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 ATP5G1P3-201ENST00000463301 410 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 RPS3AP6-201ENST00000484430 795 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC109462.1-201ENST00000491087 368 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 Y_RNA.717-201ENST00000517106 92 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 MTND1P24-201ENST00000552175 861 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 HNRNPCP1-201ENST00000556181 766 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC015802.5-201ENST00000607478 399 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 AL356490.1-201ENST00000623079 479 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC006963.1-201ENST00000624003 1052 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 CYP4F35P-202ENST00000636121 390 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 HSPA8P18-201ENST00000439846 1928 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 AL359955.1-201ENST00000455242 3275 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC010329.1-201ENST00000593903 8328 ntBASIC6.87□□□□□ -1.31
SYNE4Q8N205 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 MT-RNR2-201ENST00000387347 1559 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 RNU4-40P-201ENST00000364351 143 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 FAM96AP1-201ENST00000430879 482 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 NANOGP9-201ENST00000439890 892 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 MEMO1P4-201ENST00000453590 386 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 HIGD1AP8-201ENST00000453927 274 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 DNAJB5P1-201ENST00000454004 806 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 RN7SL447P-201ENST00000494711 245 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 CEACAMP10-202ENST00000495431 496 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC015864.1-201ENST00000496512 544 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 RNA5SP373-201ENST00000517271 95 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AP004607.2-201ENST00000533949 322 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC093783.1-201ENST00000612976 329 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC010608.3-201ENST00000625048 527 ntBASIC6.86□□□□□ -1.31
SYNE4Q8N205 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SYNE4Q8N205 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE4Q8N205 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE4Q8N205 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE4Q8N205 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SYNE4Q8N205 RNA5SP251-201ENST00000410614 137 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC093162.1-201ENST00000419682 124 ntBASIC6.85□□□□□ -1.31
SYNE4Q8N205 AC092447.3-201ENST00000426027 686 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms