Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC067904.2-201ENST00000517322 1283 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 OR5D15P-201ENST00000531671 942 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AC087763.1-201ENST00000603391 286 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 PPATP2-201ENST00000605635 508 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 U1.25-201ENST00000614085 162 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AL031658.2-201ENST00000616850 651 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 U1.31-201ENST00000620022 160 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AC079298.2-201ENST00000623885 459 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 OR52B5P-202ENST00000641118 1110 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AL161912.4-201ENST00000623889 2468 ntBASIC6.2□□□□□ -1.42
HERC6Q8IVU3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HERC6Q8IVU3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC005725.1-201ENST00000577346 2607 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 RPL23P2-201ENST00000320371 421 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AL356057.1-202ENST00000402263 756 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 MTND2P21-201ENST00000436242 1042 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 RPS26P41-201ENST00000450370 284 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC239798.3-201ENST00000454459 408 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 CYCSP53-201ENST00000455540 265 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 RN7SL97P-201ENST00000486780 299 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 RN7SKP66-201ENST00000516681 231 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC134349.2-201ENST00000535136 910 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC104785.1-201ENST00000603220 588 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC005014.3-201ENST00000605985 190 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AL096803.3-201ENST00000609032 532 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC092574.1-201ENST00000609771 420 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 MIR6820-201ENST00000611508 62 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 THAP12P9-201ENST00000503971 2360 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 AC017002.4-201ENST00000604721 1525 ntBASIC6.19□□□□□ -1.42
HERC6Q8IVU3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HERC6Q8IVU3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 UGT2B24P-201ENST00000514441 1597 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC005294.1-201ENST00000355509 281 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 SNORD51.1-201ENST00000365405 77 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 RPS26P38-201ENST00000414476 348 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 BTF3P9-201ENST00000418784 283 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 OR5W1P-201ENST00000423705 938 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC016027.5-201ENST00000427227 210 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC023141.6-201ENST00000429418 337 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms