Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RN7SL717P-201ENST00000478343 297 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 RPS3AP15-201ENST00000483874 781 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 RPS12P31-201ENST00000491419 398 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 RPS24P16-201ENST00000497294 392 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC106872.4-201ENST00000510050 523 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC022404.1-201ENST00000555320 273 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC020978.7-201ENST00000575953 1187 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 MIR6862-1-201ENST00000613016 70 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 MIR6862-2-201ENST00000614755 70 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC100778.3-201ENST00000580060 1750 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC004817.4-201ENST00000602396 3625 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC027279.1-201ENST00000568885 4284 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC007996.1-201ENST00000620414 2821 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC003973.3-201ENST00000624863 2822 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 ZNF652P1-201ENST00000442420 1309 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 SNORA64.1-201ENST00000362600 132 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 MIR323B-201ENST00000385269 82 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC007738.1-201ENST00000413892 348 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC090018.1-201ENST00000434369 367 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AP000281.1-201ENST00000444036 316 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AL450996.1-201ENST00000445574 1202 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 TPT1P1-201ENST00000458495 518 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC087672.1-201ENST00000479876 766 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC073610.1-201ENST00000489971 396 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC138866.2-201ENST00000508650 584 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC074087.1-201ENST00000512059 724 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 SCARNA20.4-201ENST00000516969 131 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 MRPS16P1-201ENST00000523462 412 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 FO393422.1-201ENST00000603908 708 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AL691477.1-201ENST00000624398 162 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AL390318.1-201ENST00000624564 687 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC007683.2-201ENST00000624681 714 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 PWAR1-201ENST00000624188 2414 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 ICE2P1-201ENST00000512800 1849 ntBASIC4.79□□□□□ -1.64
LRRC28Q86X40 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC28Q86X40 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC28Q86X40 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 SOCS5P3-201ENST00000425115 1576 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms