Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AP001496.3-201ENST00000580230 913 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AP001357.1-201ENST00000586304 1053 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AP004607.3-201ENST00000530354 3915 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 FBXL21-201ENST00000297158 1305 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RNA5SP510-201ENST00000364697 99 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RNU6-883P-201ENST00000384597 107 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 SNORA68.2-201ENST00000391263 128 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 CR848007.2-201ENST00000424918 787 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AL022331.1-201ENST00000429025 477 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RN7SL570P-201ENST00000484405 292 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RNU6-760P-201ENST00000516078 97 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RNA5SP228-201ENST00000516232 133 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 IGKV2-4-201ENST00000523070 340 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC073111.2-201ENST00000605657 1075 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AP001962.1-201ENST00000624114 559 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 HPVC1-201ENST00000629899 1198 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC091948.2-201ENST00000636510 279 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AC083843.2-201ENST00000568248 6253 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 AL445437.1-201ENST00000623157 3087 ntBASIC5.32□□□□□ -1.56
NUP54Q7Z3B4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 RN7SKP78-201ENST00000364711 318 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AMZ2P2-201ENST00000406819 1057 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms