Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NHLRC1Q6VVB1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 OR13C1P-202ENST00000641378 2919 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RN7SKP69-201ENST00000365390 305 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RNA5SP30-201ENST00000365552 115 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL034374.1-201ENST00000406329 351 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC245060.4-201ENST00000413293 1121 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AK4P4-201ENST00000419465 646 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 CR848007.2-201ENST00000424918 787 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC127526.2-201ENST00000426436 775 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL022331.1-201ENST00000429025 477 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL157827.1-201ENST00000447622 132 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL596266.1-201ENST00000448132 400 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RPS23P2-201ENST00000463671 415 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RPS17P5-201ENST00000498293 408 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 BTG4P1-201ENST00000510421 183 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC006499.4-201ENST00000510947 694 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RPS27AP18-201ENST00000515536 459 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 MRPS16P1-201ENST00000523462 412 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AP002373.2-201ENST00000541631 1060 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 CD24P2-201ENST00000565486 219 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC018809.2-201ENST00000602436 3823 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL365181.4-201ENST00000609800 547 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC239803.2-201ENST00000610161 430 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AL118556.2-201ENST00000614375 824 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 MIR6071-201ENST00000616741 78 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 MIR6861-201ENST00000618657 64 ntBASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NHLRC1Q6VVB1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
NHLRC1Q6VVB1 GAPDHP24-201ENST00000328713 983 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms