Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC005224.3-201ENST00000584683 2140 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL158152.1-201ENST00000602652 1435 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RNA5SP477-201ENST00000362639 119 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RN7SKP108-201ENST00000411367 328 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 DPPA2P3-201ENST00000411853 655 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 Z84478.1-201ENST00000438230 1219 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC064862.4-201ENST00000442180 334 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 VN1R48P-201ENST00000448149 1036 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 NDUFA5P12-201ENST00000503796 343 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 MTND3P24-201ENST00000506306 329 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC008628.1-201ENST00000508663 265 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC090958.1-201ENST00000511122 351 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RNA5SP418-201ENST00000515951 117 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RNA5SP340-201ENST00000517132 107 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AP003396.4-201ENST00000527574 265 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 OR4R2P-201ENST00000530815 597 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC022404.1-201ENST00000555320 273 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL163952.1-202ENST00000569625 600 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AP001357.1-201ENST00000586304 1053 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC119403.2-201ENST00000590960 598 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC024940.4-201ENST00000605507 246 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL450270.1-201ENST00000606160 391 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 AL356317.1-201ENST00000396110 1436 ntBASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.9□□□□□ -1.62
PDLIM3Q53GG5 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 MIR130B-202ENST00000385018 82 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AL133270.1-201ENST00000402635 279 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 RPL5P19-201ENST00000404228 893 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 RN7SKP279-201ENST00000411383 298 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 MYL6P5-201ENST00000412707 459 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AL354868.1-201ENST00000417077 482 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 RAB28P3-201ENST00000448325 597 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 CBX1P2-201ENST00000453841 458 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AC091685.2-201ENST00000454924 864 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 MTND2P30-201ENST00000456663 382 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AC108161.1-201ENST00000461060 402 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 AC093267.1-201ENST00000489176 961 ntBASIC4.9□□□□□ -1.63
PDLIM3Q53GG5 MTCO1P31-201ENST00000506355 492 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms