Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC011503.2-201ENST00000594230 1500 ntBASIC6.25□□□□□ -1.41
SHROOM1Q2M3G4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SHROOM1Q2M3G4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 NPM1P37-201ENST00000403105 874 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 OR10T1P-201ENST00000424327 947 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 VN1R54P-201ENST00000435210 1049 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC092647.3-201ENST00000443044 633 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 Z92846.1-201ENST00000456203 268 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 snoU13.20-201ENST00000459180 104 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 ASNSP4-201ENST00000511103 447 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC024940.3-201ENST00000538551 316 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC095055.1-201ENST00000603472 1113 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 FAM25E-202ENST00000608562 189 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 MTCO1P1-201ENST00000624263 1081 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AC112255.1-201ENST00000624070 2493 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 AL034549.2-201ENST00000618285 3373 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 KYNUP3-201ENST00000574386 1341 ntBASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM1Q2M3G4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 HSPA8P18-201ENST00000439846 1928 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 SNURFL-201ENST00000309296 343 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 U3.3-201ENST00000362986 216 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 SNORA51.8-201ENST00000384234 132 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 IGBP1P3-201ENST00000447449 1000 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AL645937.3-201ENST00000453647 936 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC091544.1-201ENST00000484702 348 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RN7SL423P-201ENST00000486202 304 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RPL37AP8-201ENST00000494116 276 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC105233.1-201ENST00000498840 781 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 SCARNA20.4-201ENST00000516969 131 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC090286.3-201ENST00000573133 187 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC010809.3-201ENST00000621310 641 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC091953.3-201ENST00000623220 236 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 PANDAR-201ENST00000629595 1506 ntBASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM1Q2M3G4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC125336.1-201ENST00000508893 2827 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AL359715.3-201ENST00000569267 2123 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms