Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
H3F3AP84243 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.8□□□□□ -1.64
H3F3AP84243 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.8□□□□□ -1.64
H3F3AP84243 RPS26P41-201ENST00000450370 284 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 CBX1P2-201ENST00000453841 458 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 TAAR4P-201ENST00000454843 1039 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AC011225.1-201ENST00000457751 369 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 AC135999.1-201ENST00000478962 479 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 RPL7P6-201ENST00000480903 738 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AC058823.1-201ENST00000485315 474 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 EIF3LP3-201ENST00000495197 822 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.8□□□□□ -1.64
H3F3AP84243 ATP5LP3-201ENST00000514223 304 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 BX510359.5-201ENST00000515651 304 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.8□□□□□ -1.64
H3F3AP84243 HMGB1P40-201ENST00000525121 540 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.8□□□□□ -1.64
H3F3AP84243 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.8□□□□□ -1.64
H3F3AP84243 AC108738.1-201ENST00000603703 237 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AC092944.2-201ENST00000605443 889 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AC005840.5-201ENST00000619166 599 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AC099654.11-201ENST00000638857 294 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 AL353796.1-201ENST00000561542 3241 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
H3F3AP84243 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 OR4G1P-202ENST00000641173 1788 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 AL078621.3-201ENST00000623707 2042 ntBASIC4.8□□□□□ -1.64
H3F3AP84243 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
H3F3AP84243 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
H3F3AP84243 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H3F3AP84243 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 AC079298.1-201ENST00000625026 1619 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3F3AP84243 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 RN7SKP162-201ENST00000363605 345 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 OR4K12P-201ENST00000406538 961 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AL133325.1-201ENST00000421090 382 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC079355.1-201ENST00000421770 223 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.79□□□□□ -1.64
H3F3AP84243 AC124944.2-201ENST00000429866 1242 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.79□□□□□ -1.64
H3F3AP84243 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 AL133445.1-201ENST00000467051 452 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 SIAH1P1-201ENST00000479411 923 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC069304.1-201ENST00000491593 704 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC023424.1-201ENST00000496058 459 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 RPS24P16-201ENST00000497294 392 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 IGBP1P4-201ENST00000503202 879 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 RPEP1-201ENST00000504507 658 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 HMGN1P9-201ENST00000515212 298 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 RNU6-1334P-201ENST00000516032 105 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC022360.1-201ENST00000521058 340 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.79□□□□□ -1.64
H3F3AP84243 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.79□□□□□ -1.64
H3F3AP84243 YWHABP2-201ENST00000540201 713 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.79□□□□□ -1.64
H3F3AP84243 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.79□□□□□ -1.64
H3F3AP84243 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.79□□□□□ -1.64
H3F3AP84243 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.79□□□□□ -1.64
H3F3AP84243 AC008833.1-201ENST00000611633 691 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 MIR6862-1-201ENST00000613016 70 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 MIR6862-2-201ENST00000614755 70 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 MIR6837-201ENST00000620884 64 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 AC099654.6-201ENST00000636487 512 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
H3F3AP84243 CASC19-264ENST00000641912 1184 ntBASIC4.79□□□□□ -1.64
H3F3AP84243 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3F3AP84243 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.79□□□□□ -1.64
H3F3AP84243 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H3F3AP84243 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3F3AP84243 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H3F3AP84243 AC020633.1-201ENST00000468439 2247 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms