Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.46□□□□□ -1.54
CBX1P83916 AL133406.3-201ENST00000606817 541 ntBASIC5.46□□□□□ -1.54
CBX1P83916 RFPL4AP6-201ENST00000616792 846 ntBASIC5.46□□□□□ -1.54
CBX1P83916 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.46□□□□□ -1.54
CBX1P83916 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CBX1P83916 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CBX1P83916 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CBX1P83916 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CBX1P83916 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CBX1P83916 AC017104.4-201ENST00000636283 1592 ntBASIC5.46□□□□□ -1.54
CBX1P83916 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
CBX1P83916 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CBX1P83916 KPNA2P2-201ENST00000419546 1489 ntBASIC5.45□□□□□ -1.54
CBX1P83916 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.45□□□□□ -1.54
CBX1P83916 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CBX1P83916 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CBX1P83916 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 AP000542.2-201ENST00000623199 6179 ntBASIC5.45□□□□□ -1.54
CBX1P83916 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CBX1P83916 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 AC092634.1-201ENST00000366505 199 ntBASIC5.45□□□□□ -1.54
CBX1P83916 MIR195-201ENST00000385194 87 ntBASIC5.45□□□□□ -1.54
CBX1P83916 VDAC2P1-201ENST00000399358 958 ntBASIC5.45□□□□□ -1.54
CBX1P83916 MIR1266-201ENST00000408125 84 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AL160275.2-201ENST00000412010 394 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.45□□□□□ -1.54
CBX1P83916 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.45□□□□□ -1.54
CBX1P83916 AC007161.1-204ENST00000423039 460 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AL034379.1-201ENST00000423216 253 ntBASIC5.45□□□□□ -1.54
CBX1P83916 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 NFYAP1-201ENST00000431953 972 ntBASIC5.45□□□□□ -1.54
CBX1P83916 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.45□□□□□ -1.54
CBX1P83916 RPEP4-201ENST00000437636 602 ntBASIC5.45□□□□□ -1.54
CBX1P83916 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.45□□□□□ -1.54
CBX1P83916 ARL4AP3-201ENST00000441452 574 ntBASIC5.45□□□□□ -1.54
CBX1P83916 PCNPP2-201ENST00000441651 455 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.45□□□□□ -1.54
CBX1P83916 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.45□□□□□ -1.54
CBX1P83916 GYG1P1-201ENST00000460864 698 ntBASIC5.45□□□□□ -1.54
CBX1P83916 RN7SL39P-201ENST00000462264 297 ntBASIC5.45□□□□□ -1.54
CBX1P83916 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.45□□□□□ -1.54
CBX1P83916 RPL5P33-201ENST00000487833 905 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AC020890.1-201ENST00000491837 504 ntBASIC5.45□□□□□ -1.54
CBX1P83916 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.45□□□□□ -1.54
CBX1P83916 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.45□□□□□ -1.54
CBX1P83916 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.45□□□□□ -1.54
CBX1P83916 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.45□□□□□ -1.54
CBX1P83916 AC022616.2-201ENST00000523185 300 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.45□□□□□ -1.54
CBX1P83916 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.45□□□□□ -1.54
CBX1P83916 AC027796.1-201ENST00000575593 512 ntBASIC5.45□□□□□ -1.54
CBX1P83916 MIR4311-201ENST00000580794 100 ntBASIC5.45□□□□□ -1.54
CBX1P83916 MIR4732-201ENST00000581873 76 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.45□□□□□ -1.54
CBX1P83916 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.45□□□□□ -1.54
CBX1P83916 AC011626.1-201ENST00000604710 562 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AC018695.5-201ENST00000605872 315 ntBASIC5.45□□□□□ -1.54
CBX1P83916 AC091979.2-201ENST00000607514 214 ntBASIC5.45□□□□□ -1.54
CBX1P83916 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.45□□□□□ -1.54
CBX1P83916 MIR6774-201ENST00000614651 70 ntBASIC5.45□□□□□ -1.54
CBX1P83916 OR8G7P-201ENST00000616658 848 ntBASIC5.45□□□□□ -1.54
CBX1P83916 MIR6849-201ENST00000618543 69 ntBASIC5.45□□□□□ -1.54
CBX1P83916 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.45□□□□□ -1.54
CBX1P83916 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CBX1P83916 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.45□□□□□ -1.54
CBX1P83916 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.44□□□□□ -1.54
CBX1P83916 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CBX1P83916 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.44□□□□□ -1.54
CBX1P83916 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 AC107068.1-201ENST00000563286 4218 ntBASIC5.44□□□□□ -1.54
CBX1P83916 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CBX1P83916 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 RNA5SP485-201ENST00000365053 119 ntBASIC5.44□□□□□ -1.54
CBX1P83916 HDGFP1-201ENST00000405943 252 ntBASIC5.44□□□□□ -1.54
CBX1P83916 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.44□□□□□ -1.54
CBX1P83916 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.44□□□□□ -1.54
CBX1P83916 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.44□□□□□ -1.54
CBX1P83916 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.44□□□□□ -1.54
CBX1P83916 Z80107.2-201ENST00000445127 392 ntBASIC5.44□□□□□ -1.54
CBX1P83916 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.44□□□□□ -1.54
CBX1P83916 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.44□□□□□ -1.54
CBX1P83916 NPM1P9-201ENST00000453156 844 ntBASIC5.44□□□□□ -1.54
CBX1P83916 AL034369.1-201ENST00000453808 477 ntBASIC5.44□□□□□ -1.54
CBX1P83916 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.44□□□□□ -1.54
CBX1P83916 AL354872.1-201ENST00000456361 967 ntBASIC5.44□□□□□ -1.54
CBX1P83916 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 RN7SL817P-201ENST00000480777 288 ntBASIC5.44□□□□□ -1.54
CBX1P83916 RN7SL655P-201ENST00000486087 298 ntBASIC5.44□□□□□ -1.54
CBX1P83916 AC073610.1-201ENST00000489971 396 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms