Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL359091.1-201ENST00000449048 1734 ntBASIC6.09□□□□□ -1.43
COPAP53621 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
COPAP53621 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 MIR16-2-201ENST00000362117 81 ntBASIC6.09□□□□□ -1.43
COPAP53621 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COPAP53621 AL391422.1-201ENST00000402155 436 ntBASIC6.09□□□□□ -1.43
COPAP53621 RN7SKP229-201ENST00000410465 302 ntBASIC6.09□□□□□ -1.43
COPAP53621 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.09□□□□□ -1.43
COPAP53621 AC245060.4-201ENST00000413293 1121 ntBASIC6.09□□□□□ -1.43
COPAP53621 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.09□□□□□ -1.43
COPAP53621 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 MTCYBP7-201ENST00000419540 1134 ntBASIC6.09□□□□□ -1.43
COPAP53621 AC079355.1-201ENST00000421770 223 ntBASIC6.09□□□□□ -1.43
COPAP53621 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.09□□□□□ -1.43
COPAP53621 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.09□□□□□ -1.43
COPAP53621 Z84478.1-201ENST00000438230 1219 ntBASIC6.09□□□□□ -1.43
COPAP53621 AL445665.1-202ENST00000452436 324 ntBASIC6.09□□□□□ -1.43
COPAP53621 RPL23AP23-201ENST00000452590 471 ntBASIC6.09□□□□□ -1.43
COPAP53621 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.09□□□□□ -1.43
COPAP53621 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.09□□□□□ -1.43
COPAP53621 AC008410.1-201ENST00000483777 339 ntBASIC6.09□□□□□ -1.43
COPAP53621 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 AC110760.3-202ENST00000515177 371 ntBASIC6.09□□□□□ -1.43
COPAP53621 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 SOX5P1-201ENST00000524155 1127 ntBASIC6.09□□□□□ -1.43
COPAP53621 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.09□□□□□ -1.43
COPAP53621 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 PCNAP4-201ENST00000532690 730 ntBASIC6.09□□□□□ -1.43
COPAP53621 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.09□□□□□ -1.43
COPAP53621 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 AC090912.3-201ENST00000609775 533 ntBASIC6.09□□□□□ -1.43
COPAP53621 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.09□□□□□ -1.43
COPAP53621 FRG1DP-201ENST00000635586 771 ntBASIC6.09□□□□□ -1.43
COPAP53621 AL445984.1-201ENST00000637834 659 ntBASIC6.09□□□□□ -1.43
COPAP53621 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.09□□□□□ -1.43
COPAP53621 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COPAP53621 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COPAP53621 MTCO1P11-201ENST00000429111 1528 ntBASIC6.09□□□□□ -1.44
COPAP53621 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.44
COPAP53621 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COPAP53621 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COPAP53621 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COPAP53621 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.08□□□□□ -1.44
COPAP53621 AC106872.5-201ENST00000508856 1416 ntBASIC6.08□□□□□ -1.44
COPAP53621 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.08□□□□□ -1.44
COPAP53621 OR13C1P-202ENST00000641378 2919 ntBASIC6.08□□□□□ -1.44
COPAP53621 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COPAP53621 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.08□□□□□ -1.44
COPAP53621 RNU6-1263P-201ENST00000384601 106 ntBASIC6.08□□□□□ -1.44
COPAP53621 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COPAP53621 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.08□□□□□ -1.44
COPAP53621 MTATP6P31-201ENST00000406985 692 ntBASIC6.08□□□□□ -1.44
COPAP53621 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.08□□□□□ -1.44
COPAP53621 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 BX119321.1-201ENST00000428912 797 ntBASIC6.08□□□□□ -1.44
COPAP53621 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 TUBB4BP6-201ENST00000437576 479 ntBASIC6.08□□□□□ -1.44
COPAP53621 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 RNFT1P2-201ENST00000443064 757 ntBASIC6.08□□□□□ -1.44
COPAP53621 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.08□□□□□ -1.44
COPAP53621 AC112187.1-201ENST00000455837 479 ntBASIC6.08□□□□□ -1.44
COPAP53621 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.08□□□□□ -1.44
COPAP53621 SUMO1P1-201ENST00000497904 306 ntBASIC6.08□□□□□ -1.44
COPAP53621 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 EIF4A2P5-201ENST00000529914 499 ntBASIC6.08□□□□□ -1.44
COPAP53621 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 AL512310.9-201ENST00000553311 948 ntBASIC6.08□□□□□ -1.44
COPAP53621 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 AC023158.1-201ENST00000561632 1025 ntBASIC6.08□□□□□ -1.44
COPAP53621 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 AP001357.1-201ENST00000586304 1053 ntBASIC6.08□□□□□ -1.44
COPAP53621 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.08□□□□□ -1.44
COPAP53621 MTCO2P22-201ENST00000603246 681 ntBASIC6.08□□□□□ -1.44
COPAP53621 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 AC109309.2-201ENST00000612597 332 ntBASIC6.08□□□□□ -1.44
COPAP53621 AC004477.3-201ENST00000614061 590 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms