Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 NUDT19P3-201ENST00000404698 555 ntBASIC6.39□□□□□ -1.39
NUP98P52948 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NUP98P52948 RNU4-64P-201ENST00000410795 131 ntBASIC6.39□□□□□ -1.39
NUP98P52948 RSU1P3-201ENST00000412878 835 ntBASIC6.39□□□□□ -1.39
NUP98P52948 CHEK2P3-201ENST00000416118 248 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AL158827.1-201ENST00000416300 391 ntBASIC6.39□□□□□ -1.39
NUP98P52948 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.39□□□□□ -1.39
NUP98P52948 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.39□□□□□ -1.39
NUP98P52948 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.39□□□□□ -1.39
NUP98P52948 TCEA1P1-201ENST00000449716 880 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 GYG1P1-201ENST00000460864 698 ntBASIC6.39□□□□□ -1.39
NUP98P52948 RPS17P2-201ENST00000461663 408 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AC063943.1-201ENST00000465434 453 ntBASIC6.39□□□□□ -1.39
NUP98P52948 RPL5P22-201ENST00000480199 884 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.39□□□□□ -1.39
NUP98P52948 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.39□□□□□ -1.39
NUP98P52948 MRPS33P2-201ENST00000507850 322 ntBASIC6.39□□□□□ -1.39
NUP98P52948 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 ELOCP28-201ENST00000590044 317 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.39□□□□□ -1.39
NUP98P52948 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 OR9K1P-202ENST00000641111 3217 ntBASIC6.39□□□□□ -1.39
NUP98P52948 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NUP98P52948 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
NUP98P52948 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 CEACAMP9-201ENST00000442990 513 ntBASIC6.39□□□□□ -1.39
NUP98P52948 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.39□□□□□ -1.39
NUP98P52948 AC023271.1-201ENST00000445936 1090 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AC090142.2-201ENST00000483263 416 ntBASIC6.39□□□□□ -1.39
NUP98P52948 RN7SL441P-201ENST00000492388 296 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.39□□□□□ -1.39
NUP98P52948 AC008033.2-201ENST00000542626 177 ntBASIC6.39□□□□□ -1.39
NUP98P52948 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.39□□□□□ -1.39
NUP98P52948 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.39□□□□□ -1.39
NUP98P52948 AC091042.1-201ENST00000579213 173 ntBASIC6.39□□□□□ -1.39
NUP98P52948 MIR6758-201ENST00000620653 63 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AC019206.1-201ENST00000621938 425 ntBASIC6.39□□□□□ -1.39
NUP98P52948 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NUP98P52948 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NUP98P52948 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 AC012618.3-205ENST00000637896 1496 ntBASIC6.38□□□□□ -1.39
NUP98P52948 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.38□□□□□ -1.39
NUP98P52948 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NUP98P52948 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 AL355834.1-201ENST00000556602 3965 ntBASIC6.38□□□□□ -1.39
NUP98P52948 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 AC114755.2-201ENST00000413520 361 ntBASIC6.38□□□□□ -1.39
NUP98P52948 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 AC016712.1-201ENST00000431088 378 ntBASIC6.38□□□□□ -1.39
NUP98P52948 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 AC090018.1-201ENST00000434369 367 ntBASIC6.38□□□□□ -1.39
NUP98P52948 AC099670.2-201ENST00000435130 321 ntBASIC6.38□□□□□ -1.39
NUP98P52948 RPL36AP15-201ENST00000444514 266 ntBASIC6.38□□□□□ -1.39
NUP98P52948 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.38□□□□□ -1.39
NUP98P52948 AC090804.1-201ENST00000448870 490 ntBASIC6.38□□□□□ -1.39
NUP98P52948 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NUP98P52948 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NUP98P52948 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NUP98P52948 MIR7853-201ENST00000584820 132 ntBASIC6.38□□□□□ -1.39
NUP98P52948 MIR6839-201ENST00000620425 113 ntBASIC6.38□□□□□ -1.39
NUP98P52948 MAPK10-263ENST00000641052 4307 ntBASIC6.38□□□□□ -1.39
NUP98P52948 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NUP98P52948 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.38□□□□□ -1.39
NUP98P52948 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.38□□□□□ -1.39
NUP98P52948 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NUP98P52948 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.37□□□□□ -1.39
NUP98P52948 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 AC016397.1-201ENST00000412463 242 ntBASIC6.37□□□□□ -1.39
NUP98P52948 HSPD1P12-201ENST00000429127 1069 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms