Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL078595.2-201ENST00000605309 1780 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
CLCN3P51790 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CLCN3P51790 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.96□□□□□ -1.46
CLCN3P51790 RNA5SP507-201ENST00000363603 121 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 DUTP5-201ENST00000406790 469 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 RNA5SP487-201ENST00000410186 122 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.96□□□□□ -1.46
CLCN3P51790 NPM1P22-201ENST00000427761 952 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 AC017099.1-201ENST00000448261 1028 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.96□□□□□ -1.46
CLCN3P51790 AL451063.1-201ENST00000450164 1133 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.96□□□□□ -1.46
CLCN3P51790 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.96□□□□□ -1.46
CLCN3P51790 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.96□□□□□ -1.46
CLCN3P51790 AP002981.1-201ENST00000517692 975 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
CLCN3P51790 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.96□□□□□ -1.46
CLCN3P51790 AC005341.1-201ENST00000571086 708 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.96□□□□□ -1.46
CLCN3P51790 AL139407.1-201ENST00000613826 1175 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 MIR7155-201ENST00000615925 56 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 AC003001.2-201ENST00000616294 831 ntBASIC5.96□□□□□ -1.46
CLCN3P51790 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.96□□□□□ -1.46
CLCN3P51790 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.96□□□□□ -1.46
CLCN3P51790 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.96□□□□□ -1.46
CLCN3P51790 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLCN3P51790 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.95□□□□□ -1.46
CLCN3P51790 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.95□□□□□ -1.46
CLCN3P51790 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.95□□□□□ -1.46
CLCN3P51790 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLCN3P51790 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLCN3P51790 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLCN3P51790 RNU6-386P-201ENST00000362650 107 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 RNU1-106P-201ENST00000384382 164 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AL512504.1-201ENST00000415494 778 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLCN3P51790 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.95□□□□□ -1.46
CLCN3P51790 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.95□□□□□ -1.46
CLCN3P51790 RPL12P17-201ENST00000432393 498 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 GAPDHP58-201ENST00000438477 1006 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.95□□□□□ -1.46
CLCN3P51790 GAPDHP25-201ENST00000447061 1001 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AL500527.1-201ENST00000448532 255 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 C1DP3-201ENST00000455013 423 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AC092754.1-201ENST00000472975 479 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 RPL7P6-201ENST00000480903 738 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 NDUFA5P12-201ENST00000503796 343 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.95□□□□□ -1.46
CLCN3P51790 RNA5SP373-201ENST00000517271 95 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 OR8G3P-201ENST00000533406 921 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 HNRNPCP1-201ENST00000556181 766 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.95□□□□□ -1.46
CLCN3P51790 AC007620.3-201ENST00000608131 497 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AL121612.2-201ENST00000612261 482 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AC009032.1-201ENST00000617574 431 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 AL078621.3-201ENST00000623707 2042 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 AC073869.8-201ENST00000641806 335 ntBASIC5.95□□□□□ -1.46
CLCN3P51790 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.95□□□□□ -1.46
CLCN3P51790 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLCN3P51790 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.95□□□□□ -1.46
CLCN3P51790 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLCN3P51790 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 AC138907.8-201ENST00000623981 2256 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLCN3P51790 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLCN3P51790 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLCN3P51790 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 SNORD56.6-201ENST00000384569 71 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 RPL23AP27-201ENST00000415161 451 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 RCC2P2-201ENST00000422174 918 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.94□□□□□ -1.46
CLCN3P51790 RPS23P9-201ENST00000448848 438 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC104634.1-201ENST00000452720 462 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.94□□□□□ -1.46
CLCN3P51790 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.94□□□□□ -1.46
CLCN3P51790 BX284632.1-201ENST00000478218 541 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 RPSAP50-201ENST00000481955 852 ntBASIC5.94□□□□□ -1.46
CLCN3P51790 AC016687.1-201ENST00000482574 353 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms