Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 TPTE2P6-202ENST00000445572 1007 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG3P49916 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG3P49916 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.99□□□□□ -1.29
LIG3P49916 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 AC010587.2-201ENST00000511727 448 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AC091965.2-201ENST00000512324 613 ntBASIC6.99□□□□□ -1.29
LIG3P49916 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.99□□□□□ -1.29
LIG3P49916 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG3P49916 AC124293.1-201ENST00000530034 493 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AP000873.5-201ENST00000533906 236 ntBASIC6.99□□□□□ -1.29
LIG3P49916 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
LIG3P49916 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG3P49916 ACTG1P15-201ENST00000570019 1063 ntBASIC6.99□□□□□ -1.29
LIG3P49916 RN7SL32P-201ENST00000580514 281 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 AC009220.3-201ENST00000604318 586 ntBASIC6.99□□□□□ -1.29
LIG3P49916 WBP1LP12-201ENST00000604449 331 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AL159169.2-201ENST00000610061 1269 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.99□□□□□ -1.29
LIG3P49916 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AL445647.2-201ENST00000615170 130 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AL607023.1-201ENST00000620045 248 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AC073534.2-201ENST00000620377 381 ntBASIC6.99□□□□□ -1.29
LIG3P49916 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 AC009120.2-204ENST00000621548 2032 ntBASIC6.99□□□□□ -1.29
LIG3P49916 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.99□□□□□ -1.29
LIG3P49916 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.99□□□□□ -1.29
LIG3P49916 CASC19-281ENST00000642118 1554 ntBASIC6.99□□□□□ -1.29
LIG3P49916 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 SSXP3-201ENST00000442971 1300 ntBASIC6.99□□□□□ -1.29
LIG3P49916 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG3P49916 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 AP002370.1-201ENST00000528055 1602 ntBASIC6.98□□□□□ -1.29
LIG3P49916 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG3P49916 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG3P49916 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG3P49916 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIG3P49916 RNU6-543P-201ENST00000362576 108 ntBASIC6.98□□□□□ -1.29
LIG3P49916 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG3P49916 RNU6-1215P-201ENST00000384441 102 ntBASIC6.98□□□□□ -1.29
LIG3P49916 MIR525-201ENST00000384978 85 ntBASIC6.98□□□□□ -1.29
LIG3P49916 RNU6-244P-201ENST00000391028 104 ntBASIC6.98□□□□□ -1.29
LIG3P49916 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 AP003170.5-201ENST00000397185 335 ntBASIC6.98□□□□□ -1.29
LIG3P49916 RPS27AP11-201ENST00000402798 447 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AC007435.1-201ENST00000421086 415 ntBASIC6.98□□□□□ -1.29
LIG3P49916 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC066692.1-201ENST00000421721 457 ntBASIC6.98□□□□□ -1.29
LIG3P49916 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 FAM96AP1-201ENST00000430879 482 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 DNAJC19P5-201ENST00000443295 316 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AL845321.1-201ENST00000444603 348 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIG3P49916 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AL096803.1-201ENST00000456921 1021 ntBASIC6.98□□□□□ -1.29
LIG3P49916 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AC090114.3-201ENST00000479267 829 ntBASIC6.98□□□□□ -1.29
LIG3P49916 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 CCDC11P1-201ENST00000503137 1162 ntBASIC6.98□□□□□ -1.29
LIG3P49916 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 AC010460.1-201ENST00000507087 466 ntBASIC6.98□□□□□ -1.29
LIG3P49916 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 LTV1P1-201ENST00000510683 1237 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC109445.1-201ENST00000512356 383 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 RN7SKP67-201ENST00000515905 235 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.98□□□□□ -1.29
LIG3P49916 AC083923.1-201ENST00000523708 376 ntBASIC6.98□□□□□ -1.29
LIG3P49916 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.98□□□□□ -1.29
LIG3P49916 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 AC092747.2-201ENST00000545069 983 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC089984.3-201ENST00000552838 363 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC007954.1-201ENST00000554198 494 ntBASIC6.98□□□□□ -1.29
LIG3P49916 DPPA3P2-202ENST00000557188 1219 ntBASIC6.98□□□□□ -1.29
LIG3P49916 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.98□□□□□ -1.29
LIG3P49916 AC023827.2-201ENST00000566880 1061 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 AC074051.3-201ENST00000570238 358 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.98□□□□□ -1.29
LIG3P49916 SNORA70D-201ENST00000578836 135 ntBASIC6.98□□□□□ -1.29
LIG3P49916 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.98□□□□□ -1.29
LIG3P49916 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms