Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD4P46934 RNU1-106P-201ENST00000384382 164 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AL355994.1-201ENST00000424379 260 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AC016772.1-201ENST00000444170 1261 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.18□□□□□ -1.42
NEDD4P46934 AL389915.2-201ENST00000454576 441 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.18□□□□□ -1.42
NEDD4P46934 RPS24P16-201ENST00000497294 392 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AC006427.1-201ENST00000514359 712 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AC024940.3-201ENST00000538551 316 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.18□□□□□ -1.42
NEDD4P46934 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.18□□□□□ -1.42
NEDD4P46934 AC004825.1-201ENST00000555068 586 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.18□□□□□ -1.42
NEDD4P46934 AC007066.2-202ENST00000566531 914 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AP001542.1-201ENST00000591314 200 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AC009597.2-201ENST00000604659 592 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AP005432.2-201ENST00000608162 586 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 AP005131.7-201ENST00000610087 611 ntBASIC6.18□□□□□ -1.42
NEDD4P46934 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.18□□□□□ -1.42
NEDD4P46934 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD4P46934 NR1H5P-201ENST00000452683 1377 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD4P46934 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD4P46934 AC023421.1-201ENST00000590535 1785 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD4P46934 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 MAPK10-328ENST00000641553 4009 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NEDD4P46934 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD4P46934 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 RPL23P2-201ENST00000320371 421 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 RNU1-19P-201ENST00000363306 165 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 RNA5SP90-201ENST00000364801 99 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 MIR223-201ENST00000385204 110 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 RN7SKP126-201ENST00000411143 300 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 AC005033.1-201ENST00000428904 813 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD4P46934 EEF1B2P5-201ENST00000444820 548 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 AP000797.2-201ENST00000475768 606 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 RPL7P40-201ENST00000481703 745 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.17□□□□□ -1.42
NEDD4P46934 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.17□□□□□ -1.42
NEDD4P46934 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.17□□□□□ -1.42
NEDD4P46934 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.17□□□□□ -1.42
NEDD4P46934 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD4P46934 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD4P46934 MIR6719-201ENST00000622428 87 ntBASIC6.17□□□□□ -1.42
NEDD4P46934 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
NEDD4P46934 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD4P46934 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD4P46934 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.16□□□□□ -1.42
NEDD4P46934 ADAM5-202ENST00000399789 1942 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 AP002512.4-202ENST00000641599 4530 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 PANDAR-201ENST00000629595 1506 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD4P46934 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD4P46934 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
NEDD4P46934 AC078880.4-201ENST00000617627 1749 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
NEDD4P46934 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD4P46934 SNORA17.1-201ENST00000362945 126 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 U8.4-201ENST00000363626 134 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NEDD4P46934 RPS4XP16-201ENST00000427198 791 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.16□□□□□ -1.42
NEDD4P46934 AL163193.1-201ENST00000444895 788 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 NPM1P19-201ENST00000450070 712 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 GTF2F2P1-201ENST00000511083 675 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.16□□□□□ -1.42
NEDD4P46934 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD4P46934 RNA5SP230-201ENST00000517039 122 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD4P46934 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD4P46934 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD4P46934 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 TAS2R6P-201ENST00000605022 826 ntBASIC6.16□□□□□ -1.42
NEDD4P46934 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD4P46934 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NEDD4P46934 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NEDD4P46934 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.16□□□□□ -1.42
NEDD4P46934 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD4P46934 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms