Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL590399.4-201ENST00000436561 601 ntBASIC5.85□□□□□ -1.47
MMP13P45452 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.85□□□□□ -1.47
MMP13P45452 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.85□□□□□ -1.47
MMP13P45452 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 LINC02210-201ENST00000444561 288 ntBASIC5.85□□□□□ -1.47
MMP13P45452 HMGN1P5-201ENST00000448591 263 ntBASIC5.85□□□□□ -1.47
MMP13P45452 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP13P45452 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP13P45452 RPS23P2-201ENST00000463671 415 ntBASIC5.85□□□□□ -1.47
MMP13P45452 AC022215.1-201ENST00000481770 362 ntBASIC5.85□□□□□ -1.47
MMP13P45452 RN7SL570P-201ENST00000484405 292 ntBASIC5.85□□□□□ -1.47
MMP13P45452 RPL32P33-201ENST00000487023 394 ntBASIC5.85□□□□□ -1.47
MMP13P45452 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.85□□□□□ -1.47
MMP13P45452 RPL5P23-201ENST00000496040 868 ntBASIC5.85□□□□□ -1.47
MMP13P45452 AC082651.2-201ENST00000496833 166 ntBASIC5.85□□□□□ -1.47
MMP13P45452 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP13P45452 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP13P45452 OR4A17P-201ENST00000526032 904 ntBASIC5.85□□□□□ -1.47
MMP13P45452 HNRNPRP2-201ENST00000528421 743 ntBASIC5.85□□□□□ -1.47
MMP13P45452 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.85□□□□□ -1.47
MMP13P45452 AC079600.1-201ENST00000550326 297 ntBASIC5.85□□□□□ -1.47
MMP13P45452 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.85□□□□□ -1.47
MMP13P45452 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP13P45452 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 AL671309.1-201ENST00000603750 544 ntBASIC5.85□□□□□ -1.47
MMP13P45452 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.85□□□□□ -1.47
MMP13P45452 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP13P45452 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MMP13P45452 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP13P45452 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MMP13P45452 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP13P45452 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.84□□□□□ -1.47
MMP13P45452 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 MIR375-201ENST00000362103 64 ntBASIC5.84□□□□□ -1.47
MMP13P45452 SNORA63.3-201ENST00000362682 132 ntBASIC5.84□□□□□ -1.47
MMP13P45452 U3.7-201ENST00000363668 216 ntBASIC5.84□□□□□ -1.47
MMP13P45452 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP13P45452 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MMP13P45452 MTND4P13-201ENST00000402078 1023 ntBASIC5.84□□□□□ -1.47
MMP13P45452 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP13P45452 MIR1282-201ENST00000408865 101 ntBASIC5.84□□□□□ -1.47
MMP13P45452 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.84□□□□□ -1.47
MMP13P45452 RNU6-584P-201ENST00000410350 95 ntBASIC5.84□□□□□ -1.47
MMP13P45452 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
MMP13P45452 AC002069.1-201ENST00000429649 1159 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP13P45452 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP13P45452 AC099063.2-201ENST00000446360 662 ntBASIC5.84□□□□□ -1.47
MMP13P45452 MTND1P31-201ENST00000449206 961 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP13P45452 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 AC093827.1-201ENST00000480094 861 ntBASIC5.84□□□□□ -1.47
MMP13P45452 RPS7P6-201ENST00000485777 579 ntBASIC5.84□□□□□ -1.47
MMP13P45452 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP13P45452 AC009120.1-201ENST00000493458 473 ntBASIC5.84□□□□□ -1.47
MMP13P45452 DUTP1-201ENST00000493631 470 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.84□□□□□ -1.47
MMP13P45452 GOLGA5P1-201ENST00000507317 980 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.84□□□□□ -1.47
MMP13P45452 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.84□□□□□ -1.47
MMP13P45452 RNU4-18P-201ENST00000516751 149 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC021678.3-201ENST00000517893 476 ntBASIC5.84□□□□□ -1.47
MMP13P45452 IGKV2-4-201ENST00000523070 340 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC137627.1-201ENST00000545761 289 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.84□□□□□ -1.47
MMP13P45452 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 RN7SL339P-201ENST00000580597 296 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 AC015802.2-201ENST00000589690 189 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 AC091057.3-201ENST00000602684 733 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 AC120053.1-201ENST00000607706 736 ntBASIC5.84□□□□□ -1.47
MMP13P45452 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
MMP13P45452 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AL138955.1-201ENST00000622881 1040 ntBASIC5.84□□□□□ -1.47
MMP13P45452 AC120349.3-201ENST00000624377 529 ntBASIC5.84□□□□□ -1.47
MMP13P45452 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
MMP13P45452 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.84□□□□□ -1.47
MMP13P45452 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MMP13P45452 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
MMP13P45452 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.84□□□□□ -1.48
MMP13P45452 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
MMP13P45452 AC106872.5-201ENST00000508856 1416 ntBASIC5.83□□□□□ -1.48
MMP13P45452 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.83□□□□□ -1.48
MMP13P45452 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms