Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 RPL7P39-201ENST00000481157 744 ntBASIC5.03□□□□□ -1.6
RFC3P40938 RPEP1-201ENST00000504507 658 ntBASIC5.03□□□□□ -1.6
RFC3P40938 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.03□□□□□ -1.6
RFC3P40938 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC3P40938 AC044860.2-201ENST00000561005 179 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AC106730.2-201ENST00000566641 540 ntBASIC5.03□□□□□ -1.6
RFC3P40938 RBM22P1-201ENST00000578589 1214 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AC006115.2-201ENST00000596823 202 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 AC016252.1-201ENST00000609721 474 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AP002505.2-201ENST00000623585 696 ntBASIC5.03□□□□□ -1.6
RFC3P40938 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC3P40938 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFC3P40938 AL034546.1-201ENST00000623740 3693 ntBASIC5.03□□□□□ -1.6
RFC3P40938 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC3P40938 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.03□□□□□ -1.6
RFC3P40938 CASC19-255ENST00000641733 1385 ntBASIC5.03□□□□□ -1.6
RFC3P40938 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RFC3P40938 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 RNA5SP335-201ENST00000363817 110 ntBASIC5.02□□□□□ -1.61
RFC3P40938 SNORA74A-201ENST00000364089 198 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AC005042.1-201ENST00000393397 800 ntBASIC5.02□□□□□ -1.61
RFC3P40938 SPTLC1P2-201ENST00000407089 121 ntBASIC5.02□□□□□ -1.61
RFC3P40938 RNU4-34P-201ENST00000410431 124 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AL390774.1-201ENST00000411924 246 ntBASIC5.02□□□□□ -1.61
RFC3P40938 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.02□□□□□ -1.61
RFC3P40938 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC3P40938 PTMAP6-201ENST00000439110 327 ntBASIC5.02□□□□□ -1.61
RFC3P40938 RPSAP41-201ENST00000439695 860 ntBASIC5.02□□□□□ -1.61
RFC3P40938 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC3P40938 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC3P40938 AC004815.1-201ENST00000484185 331 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 RPSAP51-201ENST00000497462 645 ntBASIC5.02□□□□□ -1.61
RFC3P40938 PGAM1P13-201ENST00000507497 754 ntBASIC5.02□□□□□ -1.61
RFC3P40938 CDC42P3-201ENST00000518493 633 ntBASIC5.02□□□□□ -1.61
RFC3P40938 OR10G5P-201ENST00000532733 358 ntBASIC5.02□□□□□ -1.61
RFC3P40938 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 BLZF2P-201ENST00000553776 1130 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 AC092944.2-201ENST00000605443 889 ntBASIC5.02□□□□□ -1.61
RFC3P40938 RNU6-84P-201ENST00000607737 102 ntBASIC5.02□□□□□ -1.61
RFC3P40938 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AC018445.2-201ENST00000622987 260 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 SAMMSON-209ENST00000641222 1100 ntBASIC5.02□□□□□ -1.61
RFC3P40938 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC3P40938 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC3P40938 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RFC3P40938 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
RFC3P40938 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.01□□□□□ -1.61
RFC3P40938 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
RFC3P40938 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RFC3P40938 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFC3P40938 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFC3P40938 AL133388.1-201ENST00000404509 287 ntBASIC5.01□□□□□ -1.61
RFC3P40938 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.01□□□□□ -1.61
RFC3P40938 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC3P40938 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFC3P40938 AL139148.1-201ENST00000427122 680 ntBASIC5.01□□□□□ -1.61
RFC3P40938 AL627308.1-201ENST00000435693 821 ntBASIC5.01□□□□□ -1.61
RFC3P40938 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RFC3P40938 RN7SL172P-201ENST00000460535 303 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms