Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP1P30622 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP1P30622 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP1P30622 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP1P30622 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP1P30622 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CLIP1P30622 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CLIP1P30622 AP000547.3-204ENST00000588548 2523 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 NXF4-202ENST00000416098 1465 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP1P30622 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CLIP1P30622 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CLIP1P30622 MIR600-201ENST00000385007 98 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 AL354868.1-201ENST00000417077 482 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 HSPD1P12-201ENST00000429127 1069 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 RPL7AP49-201ENST00000429522 581 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 AL591438.1-201ENST00000433508 581 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 RPS29P10-201ENST00000439197 166 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 AC016772.1-201ENST00000444170 1261 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 NDUFA5P8-201ENST00000449019 346 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP1P30622 OR51A1P-201ENST00000511110 946 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP1P30622 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP1P30622 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP1P30622 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP1P30622 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP1P30622 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.27□□□□□ -1.09
CLIP1P30622 MIR4330-201ENST00000579077 105 ntBASIC8.27□□□□□ -1.09
CLIP1P30622 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP1P30622 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP1P30622 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 THAP12P4-201ENST00000528321 2266 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP1P30622 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CLIP1P30622 RNVU1-6-201ENST00000364688 164 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 RN7SKP153-201ENST00000365026 316 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 AL078599.1-201ENST00000402075 293 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC8.26□□□□□ -1.09
CLIP1P30622 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.26□□□□□ -1.09
CLIP1P30622 AC073648.4-201ENST00000442655 781 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP1P30622 CBX1P2-201ENST00000453841 458 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.26□□□□□ -1.09
CLIP1P30622 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP1P30622 AC022360.1-201ENST00000521058 340 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CLIP1P30622 AC233699.1-201ENST00000569955 1168 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.26□□□□□ -1.09
CLIP1P30622 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.26□□□□□ -1.09
CLIP1P30622 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 AC112694.2-201ENST00000623697 768 ntBASIC8.26□□□□□ -1.09
CLIP1P30622 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 AC239868.2-201ENST00000564237 4527 ntBASIC8.25□□□□□ -1.09
CLIP1P30622 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP1P30622 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 AC020656.2-201ENST00000613291 5309 ntBASIC8.25□□□□□ -1.09
CLIP1P30622 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP1P30622 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CLIP1P30622 RPL19P16-201ENST00000433839 588 ntBASIC8.25□□□□□ -1.09
CLIP1P30622 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.25□□□□□ -1.09
CLIP1P30622 AC137768.1-201ENST00000549998 553 ntBASIC8.25□□□□□ -1.09
CLIP1P30622 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP1P30622 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP1P30622 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.25□□□□□ -1.09
CLIP1P30622 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CLIP1P30622 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CLIP1P30622 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.25□□□□□ -1.09
CLIP1P30622 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
CLIP1P30622 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CLIP1P30622 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP1P30622 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP1P30622 AL137058.3-201ENST00000624531 3099 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.24□□□□□ -1.09
CLIP1P30622 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.24□□□□□ -1.09
CLIP1P30622 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP1P30622 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLIP1P30622 AL353625.1-202ENST00000366273 571 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 SNORA51.8-201ENST00000384234 132 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms