Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.5□□□□□ -1.69
COL8A2P25067 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL8A2P25067 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL8A2P25067 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 AP001284.1-201ENST00000528393 2118 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL8A2P25067 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 AC006206.1-201ENST00000544842 3387 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.49□□□□□ -1.69
COL8A2P25067 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL8A2P25067 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
COL8A2P25067 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.49□□□□□ -1.69
COL8A2P25067 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 RN7SKP145-201ENST00000363291 303 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 U3.28-201ENST00000391249 210 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.49□□□□□ -1.69
COL8A2P25067 AC138761.5-201ENST00000433967 325 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AC009127.1-201ENST00000467090 155 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 RN7SL423P-201ENST00000486202 304 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.49□□□□□ -1.69
COL8A2P25067 AC091912.1-201ENST00000511351 248 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 SNORA70.11-201ENST00000515987 138 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 SNORA70.13-201ENST00000516116 138 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 AC095055.1-201ENST00000603472 1113 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AC005252.1-201ENST00000604518 1063 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 AC016590.3-201ENST00000611171 753 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AC090510.2-201ENST00000617465 629 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.49□□□□□ -1.69
COL8A2P25067 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.49□□□□□ -1.69
COL8A2P25067 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 AC079097.1-201ENST00000512187 1399 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AL359715.3-201ENST00000569267 2123 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 AL034549.2-201ENST00000618285 3373 ntBASIC4.49□□□□□ -1.69
COL8A2P25067 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.49□□□□□ -1.69
COL8A2P25067 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL8A2P25067 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.49□□□□□ -1.69
COL8A2P25067 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL8A2P25067 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL8A2P25067 AC004158.1-201ENST00000564508 4319 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 AP001029.2-203ENST00000589795 4910 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 MAPK10-338ENST00000641647 3362 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL8A2P25067 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 AL645927.1-201ENST00000396783 406 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 DBIP1-201ENST00000401435 260 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 VTI1BP4-201ENST00000427516 527 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 AC111000.6-201ENST00000514471 709 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 SCARNA20.4-201ENST00000516969 131 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 AC079064.1-201ENST00000528365 362 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 NMNAT1P5-201ENST00000559657 841 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 RN7SL356P-201ENST00000582228 248 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 AL022394.1-201ENST00000606979 292 ntBASIC4.48□□□□□ -1.69
COL8A2P25067 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
COL8A2P25067 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL8A2P25067 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL8A2P25067 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL8A2P25067 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.48□□□□□ -1.69
COL8A2P25067 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms