Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-941P-201ENST00000516346 108 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.25□□□□□ -1.73
CD28P10747 OR4A46P-201ENST00000527255 933 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC022832.1-201ENST00000530718 645 ntBASIC4.25□□□□□ -1.73
CD28P10747 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CD28P10747 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.25□□□□□ -1.73
CD28P10747 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 AC025857.2-201ENST00000602711 238 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC007938.2-201ENST00000604666 2634 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC024940.4-201ENST00000605507 246 ntBASIC4.25□□□□□ -1.73
CD28P10747 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.25□□□□□ -1.73
CD28P10747 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.25□□□□□ -1.73
CD28P10747 AC109583.2-201ENST00000617367 129 ntBASIC4.25□□□□□ -1.73
CD28P10747 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.25□□□□□ -1.73
CD28P10747 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 CYP4F35P-202ENST00000636121 390 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC074101.1-201ENST00000637861 241 ntBASIC4.25□□□□□ -1.73
CD28P10747 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 CASC19-260ENST00000641828 2001 ntBASIC4.25□□□□□ -1.73
CD28P10747 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.25□□□□□ -1.73
CD28P10747 AC012078.1-201ENST00000405035 1646 ntBASIC4.24□□□□□ -1.73
CD28P10747 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 ZNF733P-202ENST00000444809 1573 ntBASIC4.24□□□□□ -1.73
CD28P10747 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 AL121886.1-201ENST00000358609 435 ntBASIC4.24□□□□□ -1.73
CD28P10747 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.24□□□□□ -1.73
CD28P10747 RNF10P1-201ENST00000418589 369 ntBASIC4.24□□□□□ -1.73
CD28P10747 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.24□□□□□ -1.73
CD28P10747 AC007161.1-204ENST00000423039 460 ntBASIC4.24□□□□□ -1.73
CD28P10747 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 AC013410.1-201ENST00000436223 1232 ntBASIC4.24□□□□□ -1.73
CD28P10747 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 CEACAMP7-201ENST00000444105 496 ntBASIC4.24□□□□□ -1.73
CD28P10747 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.24□□□□□ -1.73
CD28P10747 AC012123.2-201ENST00000485809 248 ntBASIC4.24□□□□□ -1.73
CD28P10747 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.24□□□□□ -1.73
CD28P10747 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.24□□□□□ -1.73
CD28P10747 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.24□□□□□ -1.73
CD28P10747 RN7SKP253-201ENST00000516424 309 ntBASIC4.24□□□□□ -1.73
CD28P10747 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.24□□□□□ -1.73
CD28P10747 RPL10P14-201ENST00000565265 298 ntBASIC4.24□□□□□ -1.73
CD28P10747 AC060780.2-201ENST00000589047 198 ntBASIC4.24□□□□□ -1.73
CD28P10747 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 AP002884.5-201ENST00000595053 1132 ntBASIC4.24□□□□□ -1.73
CD28P10747 AC087763.1-201ENST00000603391 286 ntBASIC4.24□□□□□ -1.73
CD28P10747 CDY11P-201ENST00000447168 1651 ntBASIC4.24□□□□□ -1.73
CD28P10747 AC232271.1-201ENST00000602455 2715 ntBASIC4.24□□□□□ -1.73
CD28P10747 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 AC114774.1-201ENST00000507410 1770 ntBASIC4.24□□□□□ -1.73
CD28P10747 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.24□□□□□ -1.73
CD28P10747 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD28P10747 AC104964.3-201ENST00000606115 2860 ntBASIC4.24□□□□□ -1.73
CD28P10747 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.24□□□□□ -1.73
CD28P10747 HCFC2P1-201ENST00000392864 1592 ntBASIC4.23□□□□□ -1.73
CD28P10747 ICE2P1-201ENST00000512800 1849 ntBASIC4.23□□□□□ -1.73
CD28P10747 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD28P10747 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.23□□□□□ -1.73
CD28P10747 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD28P10747 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CD28P10747 RNA5SP453-201ENST00000362503 119 ntBASIC4.23□□□□□ -1.73
CD28P10747 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD28P10747 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.23□□□□□ -1.73
CD28P10747 RNU1-136P-201ENST00000384181 164 ntBASIC4.23□□□□□ -1.73
CD28P10747 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CD28P10747 OR4K12P-201ENST00000406538 961 ntBASIC4.23□□□□□ -1.73
CD28P10747 DUTP5-201ENST00000406790 469 ntBASIC4.23□□□□□ -1.73
CD28P10747 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.23□□□□□ -1.73
CD28P10747 REREP1Y-201ENST00000422655 198 ntBASIC4.23□□□□□ -1.73
CD28P10747 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.23□□□□□ -1.73
CD28P10747 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.23□□□□□ -1.73
CD28P10747 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD28P10747 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.23□□□□□ -1.73
CD28P10747 REREP2Y-201ENST00000439103 200 ntBASIC4.23□□□□□ -1.73
CD28P10747 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.23□□□□□ -1.73
CD28P10747 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.23□□□□□ -1.73
CD28P10747 AL645937.3-201ENST00000453647 936 ntBASIC4.23□□□□□ -1.73
CD28P10747 CBX1P5-201ENST00000475330 559 ntBASIC4.23□□□□□ -1.73
CD28P10747 ATP5LP5-201ENST00000483050 299 ntBASIC4.23□□□□□ -1.73
CD28P10747 RPS26P24-201ENST00000497656 331 ntBASIC4.23□□□□□ -1.73
CD28P10747 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms