Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.77□□□□□ -1.65
FREM3P0C091 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.77□□□□□ -1.65
FREM3P0C091 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.77□□□□□ -1.65
FREM3P0C091 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.77□□□□□ -1.65
FREM3P0C091 AC027216.1-201ENST00000577726 685 ntBASIC4.77□□□□□ -1.65
FREM3P0C091 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.77□□□□□ -1.65
FREM3P0C091 WBP1LP8-201ENST00000617401 327 ntBASIC4.77□□□□□ -1.65
FREM3P0C091 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.77□□□□□ -1.65
FREM3P0C091 AC026367.3-201ENST00000619032 590 ntBASIC4.77□□□□□ -1.65
FREM3P0C091 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.77□□□□□ -1.65
FREM3P0C091 AC073869.10-201ENST00000642016 354 ntBASIC4.77□□□□□ -1.65
FREM3P0C091 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
FREM3P0C091 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
FREM3P0C091 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FREM3P0C091 AL031595.2-201ENST00000624215 19071 ntBASIC4.77□□□□□ -1.65
FREM3P0C091 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
FREM3P0C091 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FREM3P0C091 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FREM3P0C091 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FREM3P0C091 NXF4-202ENST00000416098 1465 ntBASIC4.77□□□□□ -1.65
FREM3P0C091 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.77□□□□□ -1.65
FREM3P0C091 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.76□□□□□ -1.65
FREM3P0C091 RBMY2KP-201ENST00000418221 992 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 SLC35E1P1-201ENST00000419313 864 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 AC090804.1-201ENST00000448870 490 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 FAR2P1-206ENST00000449736 709 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 PSAT1P4-201ENST00000466500 526 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 RPL7AP6-201ENST00000477943 801 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 RN7SL423P-201ENST00000486202 304 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.76□□□□□ -1.65
FREM3P0C091 NPM1P5-201ENST00000557228 838 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AC019322.1-201ENST00000571869 389 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 BNIP3P32-201ENST00000600015 554 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AC009597.2-201ENST00000604659 592 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.76□□□□□ -1.65
FREM3P0C091 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.76□□□□□ -1.65
FREM3P0C091 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.76□□□□□ -1.65
FREM3P0C091 MAPK10-328ENST00000641553 4009 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AC114947.2-201ENST00000565748 2125 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AL450345.1-202ENST00000605741 3881 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 ADAM5-202ENST00000399789 1942 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.76□□□□□ -1.65
FREM3P0C091 AC027279.1-201ENST00000568885 4284 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
FREM3P0C091 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.76□□□□□ -1.65
FREM3P0C091 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 RNA5SP319-201ENST00000362768 119 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 AC124944.2-201ENST00000429866 1242 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 PSMD10P3-201ENST00000437000 448 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 SUMO2P1-206ENST00000445436 284 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AC115223.1-201ENST00000466377 870 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.76□□□□□ -1.65
FREM3P0C091 IGLV2-28-201ENST00000520681 304 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 OR5AZ1P-201ENST00000527448 943 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.76□□□□□ -1.65
FREM3P0C091 MIR4700-201ENST00000578311 74 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.76□□□□□ -1.65
FREM3P0C091 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.76□□□□□ -1.65
FREM3P0C091 EIF3EP2-201ENST00000423042 1814 ntBASIC4.76□□□□□ -1.65
FREM3P0C091 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
FREM3P0C091 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.76□□□□□ -1.65
FREM3P0C091 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.76□□□□□ -1.65
FREM3P0C091 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FREM3P0C091 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.76□□□□□ -1.65
FREM3P0C091 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
FREM3P0C091 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FREM3P0C091 BCORP1-203ENST00000513194 5093 ntBASIC4.75□□□□□ -1.65
FREM3P0C091 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
FREM3P0C091 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FREM3P0C091 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
FREM3P0C091 SNORA67-201ENST00000384423 137 ntBASIC4.75□□□□□ -1.65
FREM3P0C091 MIR105-1-201ENST00000385222 81 ntBASIC4.75□□□□□ -1.65
FREM3P0C091 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
FREM3P0C091 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FREM3P0C091 RPS11P7-201ENST00000442125 465 ntBASIC4.75□□□□□ -1.65
FREM3P0C091 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.75□□□□□ -1.65
FREM3P0C091 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.75□□□□□ -1.65
FREM3P0C091 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.75□□□□□ -1.65
FREM3P0C091 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.75□□□□□ -1.65
FREM3P0C091 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.75□□□□□ -1.65
FREM3P0C091 AC010245.2-201ENST00000606908 1167 ntBASIC4.75□□□□□ -1.65
FREM3P0C091 AC074101.1-201ENST00000637861 241 ntBASIC4.75□□□□□ -1.65
FREM3P0C091 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms