Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 UGT2B24P-201ENST00000514441 1597 ntBASIC6.03□□□□□ -1.44
MMP3P08254 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP3P08254 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 SNORA17.1-201ENST00000362945 126 ntBASIC6.03□□□□□ -1.44
MMP3P08254 Y_RNA.110-201ENST00000363220 99 ntBASIC6.03□□□□□ -1.44
MMP3P08254 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP3P08254 AC007064.3-201ENST00000422608 359 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC013410.2-201ENST00000422627 201 ntBASIC6.03□□□□□ -1.44
MMP3P08254 OR10T1P-201ENST00000424327 947 ntBASIC6.03□□□□□ -1.44
MMP3P08254 RIMKLBP2-201ENST00000424737 654 ntBASIC6.03□□□□□ -1.44
MMP3P08254 RPS23P9-201ENST00000448848 438 ntBASIC6.03□□□□□ -1.44
MMP3P08254 OR6C72P-201ENST00000451403 892 ntBASIC6.03□□□□□ -1.44
MMP3P08254 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 AZGP1P2-201ENST00000454506 345 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC091685.2-201ENST00000454924 864 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AL356390.1-201ENST00000455684 397 ntBASIC6.03□□□□□ -1.44
MMP3P08254 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP3P08254 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP3P08254 NDUFB5P1-201ENST00000508134 564 ntBASIC6.03□□□□□ -1.44
MMP3P08254 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP3P08254 AC109464.1-201ENST00000511091 819 ntBASIC6.03□□□□□ -1.44
MMP3P08254 RNA5SP373-201ENST00000517271 95 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP3P08254 CDH12P4-201ENST00000517835 295 ntBASIC6.03□□□□□ -1.44
MMP3P08254 CDH12P3-201ENST00000517935 295 ntBASIC6.03□□□□□ -1.44
MMP3P08254 CDH12P1-201ENST00000518435 295 ntBASIC6.03□□□□□ -1.44
MMP3P08254 OR8K2P-201ENST00000524645 927 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AP000676.2-201ENST00000529711 301 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 OR5D15P-201ENST00000531671 942 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP3P08254 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.03□□□□□ -1.44
MMP3P08254 NPM1P42-201ENST00000560329 862 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC114947.2-201ENST00000565748 2125 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC122134.1-202ENST00000569111 1201 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP3P08254 OR1F2P-201ENST00000570470 933 ntBASIC6.03□□□□□ -1.44
MMP3P08254 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP3P08254 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.03□□□□□ -1.44
MMP3P08254 AC020915.5-201ENST00000596836 964 ntBASIC6.03□□□□□ -1.44
MMP3P08254 AC095055.1-201ENST00000603472 1113 ntBASIC6.03□□□□□ -1.44
MMP3P08254 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
MMP3P08254 AC006600.2-201ENST00000624834 2506 ntBASIC6.03□□□□□ -1.44
MMP3P08254 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
MMP3P08254 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 AC139426.3-201ENST00000605648 2059 ntBASIC6.03□□□□□ -1.44
MMP3P08254 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 AL353796.1-201ENST00000561542 3241 ntBASIC6.03□□□□□ -1.44
MMP3P08254 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
MMP3P08254 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
MMP3P08254 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.02□□□□□ -1.45
MMP3P08254 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 AL158152.1-201ENST00000602652 1435 ntBASIC6.02□□□□□ -1.45
MMP3P08254 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
MMP3P08254 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
MMP3P08254 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
MMP3P08254 RN7SKP115-201ENST00000363177 317 ntBASIC6.02□□□□□ -1.45
MMP3P08254 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.02□□□□□ -1.45
MMP3P08254 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.02□□□□□ -1.45
MMP3P08254 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
MMP3P08254 RNU6-564P-201ENST00000410983 104 ntBASIC6.02□□□□□ -1.45
MMP3P08254 RPL37P18-201ENST00000411602 243 ntBASIC6.02□□□□□ -1.45
MMP3P08254 NIPA2P1-201ENST00000426223 976 ntBASIC6.02□□□□□ -1.45
MMP3P08254 RPL7P56-201ENST00000429441 717 ntBASIC6.02□□□□□ -1.45
MMP3P08254 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.02□□□□□ -1.45
MMP3P08254 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.02□□□□□ -1.45
MMP3P08254 KRT8P51-201ENST00000438938 274 ntBASIC6.02□□□□□ -1.45
MMP3P08254 AL772161.1-201ENST00000439130 476 ntBASIC6.02□□□□□ -1.45
MMP3P08254 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.02□□□□□ -1.45
MMP3P08254 AC090114.3-201ENST00000479267 829 ntBASIC6.02□□□□□ -1.45
MMP3P08254 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 RPS4XP20-201ENST00000505751 772 ntBASIC6.02□□□□□ -1.45
MMP3P08254 AC092593.2-201ENST00000513866 913 ntBASIC6.02□□□□□ -1.45
MMP3P08254 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.02□□□□□ -1.45
MMP3P08254 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.02□□□□□ -1.45
MMP3P08254 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.02□□□□□ -1.45
MMP3P08254 MTND2P13-201ENST00000577438 1039 ntBASIC6.02□□□□□ -1.45
MMP3P08254 MIR4436B2-201ENST00000581415 91 ntBASIC6.02□□□□□ -1.45
MMP3P08254 MIR4436B1-201ENST00000583272 91 ntBASIC6.02□□□□□ -1.45
MMP3P08254 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.02□□□□□ -1.45
MMP3P08254 AP000769.2-201ENST00000602344 396 ntBASIC6.02□□□□□ -1.45
MMP3P08254 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.02□□□□□ -1.45
MMP3P08254 AL078621.3-201ENST00000623707 2042 ntBASIC6.02□□□□□ -1.45
MMP3P08254 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.02□□□□□ -1.45
MMP3P08254 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MMP3P08254 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MMP3P08254 AC112255.1-201ENST00000624070 2493 ntBASIC6.01□□□□□ -1.45
MMP3P08254 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms