Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 U1.34-201ENST00000618578 162 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 AL445493.3-201ENST00000619568 477 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 U1.31-201ENST00000620022 160 ntBASIC6.59□□□□□ -1.35
HLA-DOAP06340 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOAP06340 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOAP06340 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
HLA-DOAP06340 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.59□□□□□ -1.36
HLA-DOAP06340 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.59□□□□□ -1.36
HLA-DOAP06340 ZNF101P1-201ENST00000435701 1720 ntBASIC6.59□□□□□ -1.36
HLA-DOAP06340 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC068769.1-201ENST00000474767 2426 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 RNU1-19P-201ENST00000363306 165 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 MIR223-201ENST00000385204 110 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AL133325.1-201ENST00000421090 382 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 AJ239321.1-201ENST00000424255 564 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 MTND1P31-201ENST00000449206 961 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 RN7SL172P-201ENST00000460535 303 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 RPS4XP1-201ENST00000482189 787 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 RN7SKP248-201ENST00000516278 305 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC113192.3-201ENST00000529152 742 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 OR10G5P-201ENST00000532733 358 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC009974.1-201ENST00000608881 455 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 AL163051.2-201ENST00000618976 735 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 SAMMSON-227ENST00000642114 1199 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOAP06340 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOAP06340 CASC19-261ENST00000641853 1638 ntBASIC6.58□□□□□ -1.36
HLA-DOAP06340 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC078880.4-201ENST00000617627 1749 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 RNA5SP183-201ENST00000362452 119 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 RNA5SP335-201ENST00000363817 110 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 AL512504.1-201ENST00000415494 778 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC073464.3-201ENST00000422564 712 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 USP24P1-201ENST00000433802 779 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 MRPS33P4-201ENST00000434892 317 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 NANOGP9-201ENST00000439890 892 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC004854.1-201ENST00000440356 349 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC099063.2-201ENST00000446360 662 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC105399.1-202ENST00000447303 205 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AL596266.1-201ENST00000448132 400 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 RPL12P39-201ENST00000455456 496 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 RN7SL515P-201ENST00000463999 297 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 ATP5LP5-201ENST00000483050 299 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 RNA5SP92-201ENST00000516437 110 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC114878.2-201ENST00000604863 1251 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC093783.1-201ENST00000612976 329 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC016769.4-201ENST00000616893 535 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms