Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 OR9G4-201ENST00000302957 984 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 MIR589-201ENST00000385238 99 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 AL133482.1-201ENST00000415988 498 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.3□□□□□ -1.4
COL1A1P02452 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.3□□□□□ -1.4
COL1A1P02452 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 AC011753.3-201ENST00000443436 406 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 TPT1P13-201ENST00000449760 499 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.3□□□□□ -1.4
COL1A1P02452 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
COL1A1P02452 AC009117.1-201ENST00000563948 554 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 AC073575.2-201ENST00000614212 627 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.3□□□□□ -1.4
COL1A1P02452 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
COL1A1P02452 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.3□□□□□ -1.4
COL1A1P02452 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.3□□□□□ -1.4
COL1A1P02452 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 NXF4-202ENST00000416098 1465 ntBASIC6.3□□□□□ -1.4
COL1A1P02452 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL1A1P02452 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.3□□□□□ -1.4
COL1A1P02452 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.3□□□□□ -1.4
COL1A1P02452 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL1A1P02452 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL1A1P02452 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 HSPA8P15-201ENST00000401676 786 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.29□□□□□ -1.4
COL1A1P02452 KNOP1P3-201ENST00000446933 426 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.29□□□□□ -1.4
COL1A1P02452 RPS29P33-201ENST00000456717 146 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.29□□□□□ -1.4
COL1A1P02452 BNIP3P1-201ENST00000547295 580 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 AC011487.3-201ENST00000593607 453 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 AC011626.1-201ENST00000604710 562 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 MEMO1P5-201ENST00000604810 406 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 MIR7641-1-201ENST00000627518 61 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 MIPEPP2-201ENST00000422560 1819 ntBASIC6.29□□□□□ -1.4
COL1A1P02452 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.29□□□□□ -1.4
COL1A1P02452 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL1A1P02452 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.29□□□□□ -1.4
COL1A1P02452 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.29□□□□□ -1.4
COL1A1P02452 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.29□□□□□ -1.4
COL1A1P02452 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
COL1A1P02452 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.29□□□□□ -1.4
COL1A1P02452 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.29□□□□□ -1.4
COL1A1P02452 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.29□□□□□ -1.4
COL1A1P02452 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.29□□□□□ -1.4
COL1A1P02452 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL1A1P02452 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.28□□□□□ -1.4
COL1A1P02452 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.28□□□□□ -1.4
COL1A1P02452 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.28□□□□□ -1.4
COL1A1P02452 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.28□□□□□ -1.4
COL1A1P02452 REG1CP-206ENST00000447469 496 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 RPL7P40-201ENST00000481703 745 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 AC090058.1-201ENST00000498788 435 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 IMPA1P1-201ENST00000510718 842 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.28□□□□□ -1.4
COL1A1P02452 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.28□□□□□ -1.4
COL1A1P02452 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.28□□□□□ -1.4
COL1A1P02452 AC018552.1-201ENST00000562099 811 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 MIR4737-201ENST00000583979 81 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.28□□□□□ -1.4
COL1A1P02452 AC087283.1-201ENST00000604029 1074 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 AL356608.1-201ENST00000610034 820 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 AL356752.1-201ENST00000615844 593 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
COL1A1P02452 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL1A1P02452 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL1A1P02452 AC007996.1-201ENST00000620414 2821 ntBASIC6.28□□□□□ -1.4
COL1A1P02452 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL1A1P02452 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms