Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC097505.1-201ENST00000610199 565 ntBASIC5.33□□□□□ -1.56
SHOX2O60902 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.33□□□□□ -1.56
SHOX2O60902 MIR6721-201ENST00000617181 87 ntBASIC5.33□□□□□ -1.56
SHOX2O60902 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.33□□□□□ -1.56
SHOX2O60902 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHOX2O60902 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.33□□□□□ -1.56
SHOX2O60902 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SHOX2O60902 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHOX2O60902 AC053481.2-202ENST00000582394 1500 ntBASIC5.33□□□□□ -1.56
SHOX2O60902 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.33□□□□□ -1.56
SHOX2O60902 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.32□□□□□ -1.56
SHOX2O60902 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.32□□□□□ -1.56
SHOX2O60902 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 MTHFD2P5-201ENST00000320415 844 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 RNA5SP500-201ENST00000364486 119 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 AL359885.1-201ENST00000415786 903 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.32□□□□□ -1.56
SHOX2O60902 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.32□□□□□ -1.56
SHOX2O60902 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.32□□□□□ -1.56
SHOX2O60902 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.32□□□□□ -1.56
SHOX2O60902 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.32□□□□□ -1.56
SHOX2O60902 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.32□□□□□ -1.56
SHOX2O60902 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 RPSAP37-201ENST00000470913 821 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 AC098847.1-201ENST00000473094 348 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 DEFB109F-201ENST00000491870 277 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 IGKV3D-34-201ENST00000522638 302 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.32□□□□□ -1.56
SHOX2O60902 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.32□□□□□ -1.56
SHOX2O60902 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.32□□□□□ -1.56
SHOX2O60902 AC005828.7-201ENST00000607331 556 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 AC073389.3-201ENST00000609434 935 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.32□□□□□ -1.56
SHOX2O60902 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
SHOX2O60902 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.32□□□□□ -1.56
SHOX2O60902 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.32□□□□□ -1.56
SHOX2O60902 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.32□□□□□ -1.56
SHOX2O60902 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 DHX9P1-201ENST00000436565 3076 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 OR4G1P-202ENST00000641173 1788 ntBASIC5.32□□□□□ -1.56
SHOX2O60902 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHOX2O60902 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.31□□□□□ -1.56
SHOX2O60902 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.31□□□□□ -1.56
SHOX2O60902 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SHOX2O60902 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.31□□□□□ -1.56
SHOX2O60902 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 AP000580.1-201ENST00000404439 358 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
SHOX2O60902 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 GAPDHP58-201ENST00000438477 1006 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 HMGB1P7-201ENST00000450921 612 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 RN7SL254P-201ENST00000460609 284 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 AP002884.1-201ENST00000479691 655 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.31□□□□□ -1.56
SHOX2O60902 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.31□□□□□ -1.56
SHOX2O60902 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.31□□□□□ -1.56
SHOX2O60902 IGLVIV-64-201ENST00000518581 301 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.31□□□□□ -1.56
SHOX2O60902 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 AC051619.2-201ENST00000559063 397 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.31□□□□□ -1.56
SHOX2O60902 RN7SL176P-201ENST00000580352 264 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.31□□□□□ -1.56
SHOX2O60902 AC079315.1-201ENST00000602952 623 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 AC009027.1-201ENST00000604510 479 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 uc_338.31-201ENST00000615595 186 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 MIR6071-201ENST00000616741 78 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 AL359742.1-201ENST00000622497 540 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 MTCO1P1-201ENST00000624263 1081 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SHOX2O60902 AC073869.7-201ENST00000640874 297 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHOX2O60902 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SHOX2O60902 KARSP1-201ENST00000451871 1752 ntBASIC5.31□□□□□ -1.56
SHOX2O60902 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SHOX2O60902 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SHOX2O60902 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHOX2O60902 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHOX2O60902 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
SHOX2O60902 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHOX2O60902 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHOX2O60902 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHOX2O60902 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHOX2O60902 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHOX2O60902 SNORA51.9-201ENST00000384295 124 ntBASIC5.3□□□□□ -1.56
SHOX2O60902 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.3□□□□□ -1.56
SHOX2O60902 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.3□□□□□ -1.56
SHOX2O60902 AC013429.2-201ENST00000418798 781 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms