Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR589-201ENST00000385238 99 ntBASIC5.25□□□□□ -1.57
SNX3O60493 EEF1B2P8-201ENST00000414101 671 ntBASIC5.25□□□□□ -1.57
SNX3O60493 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
SNX3O60493 AL512504.1-201ENST00000415494 778 ntBASIC5.25□□□□□ -1.57
SNX3O60493 MEAF6P1-201ENST00000416092 327 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 AL356806.1-201ENST00000422524 916 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AC106901.1-201ENST00000425086 698 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AC099782.1-201ENST00000425889 474 ntBASIC5.25□□□□□ -1.57
SNX3O60493 NPM1P26-201ENST00000426339 738 ntBASIC5.25□□□□□ -1.57
SNX3O60493 MGAT2P2-201ENST00000427194 797 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AC126120.1-201ENST00000431082 470 ntBASIC5.25□□□□□ -1.57
SNX3O60493 TXNP2-201ENST00000443918 295 ntBASIC5.25□□□□□ -1.57
SNX3O60493 MRPL35P2-201ENST00000448009 511 ntBASIC5.25□□□□□ -1.57
SNX3O60493 DNAJB5P1-201ENST00000454004 806 ntBASIC5.25□□□□□ -1.57
SNX3O60493 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.25□□□□□ -1.57
SNX3O60493 RN7SL393P-201ENST00000463588 296 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AL122020.1-201ENST00000472287 459 ntBASIC5.25□□□□□ -1.57
SNX3O60493 RN7SL502P-201ENST00000481857 290 ntBASIC5.25□□□□□ -1.57
SNX3O60493 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 NPM1P29-201ENST00000483112 803 ntBASIC5.25□□□□□ -1.57
SNX3O60493 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.25□□□□□ -1.57
SNX3O60493 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX3O60493 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX3O60493 RPA2P1-201ENST00000556557 721 ntBASIC5.25□□□□□ -1.57
SNX3O60493 DPRXP4-201ENST00000578053 568 ntBASIC5.25□□□□□ -1.57
SNX3O60493 RN7SL356P-201ENST00000582228 248 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AC090774.2-201ENST00000584708 322 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AC090236.2-201ENST00000587933 1101 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AP005131.7-201ENST00000610087 611 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX3O60493 DDX18P6-201ENST00000450119 1997 ntBASIC5.25□□□□□ -1.57
SNX3O60493 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX3O60493 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.25□□□□□ -1.57
SNX3O60493 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX3O60493 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 AC063976.2-201ENST00000425667 3556 ntBASIC5.24□□□□□ -1.57
SNX3O60493 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX3O60493 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SNX3O60493 AC005294.1-201ENST00000355509 281 ntBASIC5.24□□□□□ -1.57
SNX3O60493 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX3O60493 MIR130B-202ENST00000385018 82 ntBASIC5.24□□□□□ -1.57
SNX3O60493 GABARAPL3-201ENST00000412799 354 ntBASIC5.24□□□□□ -1.57
SNX3O60493 SEPT7P8-201ENST00000413308 775 ntBASIC5.24□□□□□ -1.57
SNX3O60493 OR52N3P-201ENST00000413417 934 ntBASIC5.24□□□□□ -1.57
SNX3O60493 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AC013470.3-201ENST00000420252 1194 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX3O60493 AL590623.1-201ENST00000427864 105 ntBASIC5.24□□□□□ -1.57
SNX3O60493 VN1R110P-201ENST00000438988 971 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX3O60493 RPL7AP61-201ENST00000443410 636 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AC092601.1-201ENST00000444526 383 ntBASIC5.24□□□□□ -1.57
SNX3O60493 WDR82P2-201ENST00000444540 928 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX3O60493 AL500527.1-201ENST00000448532 255 ntBASIC5.24□□□□□ -1.57
SNX3O60493 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX3O60493 RN7SL267P-201ENST00000485107 261 ntBASIC5.24□□□□□ -1.57
SNX3O60493 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SNX3O60493 PRMT5P1-201ENST00000514351 598 ntBASIC5.24□□□□□ -1.57
SNX3O60493 MTND2P7-201ENST00000521337 640 ntBASIC5.24□□□□□ -1.57
SNX3O60493 OR7E10P-201ENST00000526420 991 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX3O60493 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX3O60493 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX3O60493 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX3O60493 AC006272.2-201ENST00000594725 163 ntBASIC5.24□□□□□ -1.57
SNX3O60493 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.24□□□□□ -1.57
SNX3O60493 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.24□□□□□ -1.57
SNX3O60493 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.24□□□□□ -1.57
SNX3O60493 AC108673.3-201ENST00000609183 335 ntBASIC5.24□□□□□ -1.57
SNX3O60493 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX3O60493 AC211486.4-201ENST00000621495 113 ntBASIC5.24□□□□□ -1.57
SNX3O60493 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SNX3O60493 AC119674.1-220ENST00000641502 1048 ntBASIC5.24□□□□□ -1.57
SNX3O60493 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX3O60493 AL354854.1-201ENST00000455940 1363 ntBASIC5.24□□□□□ -1.57
SNX3O60493 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SNX3O60493 AL353796.1-201ENST00000561542 3241 ntBASIC5.24□□□□□ -1.57
SNX3O60493 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX3O60493 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX3O60493 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SNX3O60493 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX3O60493 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX3O60493 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.23□□□□□ -1.57
SNX3O60493 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX3O60493 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX3O60493 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms